RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 TRPM3Q9HCF6 1732 aaPredicted RBP1.39□□□□□ -2.19
LSM6-205ENST00000507449 ADGRB3O60242 1522 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 NLRC5Q86WI3 1866 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 FABP12A6NFH5 140 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 CALUO43852 315 aaPredicted RBP1.38□□□□□ -2.19
LSM6-205ENST00000507449 ARL6IP5O75915 188 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 OR13C7P0DN81 318 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 GZMHP20718 246 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 CDK2P24941 298 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 BLVRBP30043 206 aaPredicted RBP1.38□□□□□ -2.19
LSM6-205ENST00000507449 AGTR1P30556 359 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 PPP1CCP36873 323 aaKnown RBP1.38□□□□□ -2.19
LSM6-205ENST00000507449 UBE2G2P60604 165 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 FGF12P61328 243 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 MRPL51Q4U2R6 128 aaKnown RBP1.38□□□□□ -2.19
LSM6-205ENST00000507449 ZNF322Q6U7Q0 402 aaPredicted RBP1.38□□□□□ -2.19
LSM6-205ENST00000507449 SPATA24Q86W54 205 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 PLCZ1Q86YW0 608 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 PPCDCQ96CD2 204 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 TRNT1Q96Q11 434 aaKnown RBP1.38□□□□□ -2.19
LSM6-205ENST00000507449 NDEL1Q9GZM8 345 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 TUBA4BQ9H853 241 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 UBQLN4Q9NRR5 601 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 MINOS1-NBL1R4GNA1 71 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 VWDEQ8N2E2 1590 aa1.38□□□□□ -2.19
LSM6-205ENST00000507449 MYO16Q9Y6X6 1858 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 METTL15A6NJ78 407 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 CRTAPO75718 401 aaPredicted RBP1.37□□□□□ -2.19
LSM6-205ENST00000507449 OR4A8P0C604 315 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 ZNF7P17097 686 aaPredicted RBP1.37□□□□□ -2.19
LSM6-205ENST00000507449 HSPA9P38646 679 aaKnown RBP1.37□□□□□ -2.19
LSM6-205ENST00000507449 CRATP43155 626 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 OR1E2P47887 323 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 DAPP51397 102 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 KRTAP12-1P59990 96 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 TBC1D28Q2M2D7 210 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 Q8NDZ9 215 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 OR52E4Q8NGH9 312 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 GPR119Q8TDV5 335 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 SMIM12Q96EX1 92 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 ACY3Q96HD9 319 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 ZNF514Q96K75 400 aaPredicted RBP1.37□□□□□ -2.19
LSM6-205ENST00000507449 CAPZA3Q96KX2 299 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 MED18Q9BUE0 208 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 UPF3BQ9BZI7 483 aaKnown RBP1.37□□□□□ -2.19
LSM6-205ENST00000507449 SMDT1Q9H4I9 107 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 C11orf1Q9H5F2 150 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 TP53TG1Q9Y2A0 90 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 PUS1Q9Y606 427 aaKnown RBP eCLIP1.37□□□□□ -2.19
LSM6-205ENST00000507449 PLCH2O75038 1416 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 PTPRJQ12913 1337 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 RAD50Q92878 1312 aa1.37□□□□□ -2.19
LSM6-205ENST00000507449 LCTP09848 1927 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 VPS37CA5D8V6 355 aaPredicted RBP1.36□□□□□ -2.19
LSM6-205ENST00000507449 FTCDNL1E5RQL4 147 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 ATP6V1G2O95670 118 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 IGLV3-27P01718 113 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 OPRM1P35372 400 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 GABRA4P48169 554 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 TSPEAR-AS2P59090 65 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 SKP1P63208 163 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 SLC35A2P78381 396 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 ZNF117Q03924 483 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 SMAGPQ0VAQ4 97 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 HES1Q14469 280 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 SS18Q15532 418 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 HLA-DRB5Q30154 266 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 OR4C16Q8NGL9 310 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 OR51H1Q8NH63 302 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 PHOSPHO2Q8TCD6 241 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 ABHD14BQ96IU4 210 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 RBP7Q96R05 134 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 TBX5Q99593 518 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 TMEM208Q9BTX3 173 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 ZNF426Q9BUY5 554 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 METTL9Q9H1A3 318 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 MED28Q9H204 178 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 OR51B6Q9H340 312 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 LRRC19Q9H756 370 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 GLS2Q9UI32 602 aa1.36□□□□□ -2.19
LSM6-205ENST00000507449 PIK3R4Q99570 1358 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 NPATQ14207 1427 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 TRGV4A0A0C4DH28 118 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 A0A0J9YX75 114 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 DAPL1A0PJW8 107 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 GOLGA6L10A6NI86 522 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 AZIN1O14977 448 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 ATP8B1O43520 1251 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 LY6HO94772 140 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 ATP5G1P05496 136 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 PET100P0DJ07 73 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 ESDP10768 282 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 CPMP14384 443 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 NQO1P15559 274 aaKnown RBP1.35□□□□□ -2.19
LSM6-205ENST00000507449 F8A1P23610 371 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 AKR1C2P52895 323 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 DAD1P61803 113 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 DMTNQ08495 405 aa1.35□□□□□ -2.19
LSM6-205ENST00000507449 TMEM267Q0VDI3 215 aaPredicted RBP1.35□□□□□ -2.19
LSM6-205ENST00000507449 CLEC12BQ2HXU8 276 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms