RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ZNF93P35789 620 aaPredicted RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 CD79BP40259 229 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 RFC3P40938 356 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 HTR5AP47898 357 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 CX3CR1P49238 355 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 PRKXP51817 358 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 RAG2P55895 527 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF121P58317 390 aaPredicted RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ACTBP60709 375 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 UBE2NP61088 152 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 RPS11P62280 158 aaKnown RBP eCLIP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ACTG1P63261 375 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 SSBP1Q04837 148 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 SNTB2Q13425 540 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ENDOGQ14249 297 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 GSG1Q2KHT4 349 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 TBC1D28Q2M2D7 210 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 CEACAM16Q2WEN9 425 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 C1orf100Q5SVJ3 147 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 TMEM69Q5SWH9 247 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 GLYATL3Q5SZD4 288 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 C9orf129Q5T035 196 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 TSPO2Q5TGU0 170 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 CNIH2Q6PI25 160 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 PLET1Q6UQ28 207 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 STAC2Q6ZMT1 411 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 Q6ZT83 130 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 UTS2BQ765I0 119 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 OR2W3Q7Z3T1 314 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 LRRC18Q8N456 261 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 TOMM5Q8N4H5 51 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 JAGN1Q8N5M9 183 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 STEAP2Q8NFT2 490 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 OR1M1Q8NGA1 313 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 OR6K3Q8NGY3 331 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 KCNG3Q8TAE7 436 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 FNDC9Q8TBE3 224 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 TRMT10AQ8TBZ6 339 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ABHD3Q8WU67 409 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 APOBEC3DQ96AK3 386 aaPredicted RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 FGGYQ96C11 551 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 MUCL1Q96DR8 90 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 MRPS24Q96EL2 167 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF799Q96GE5 643 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 GPER1Q99527 375 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 C7orf50Q9BRJ6 194 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 C19orf24Q9BVV8 132 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 SFXN3Q9BWM7 321 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 HES7Q9BYE0 225 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 OR2H1Q9GZK4 316 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 CST11Q9H112 138 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ATG5Q9H1Y0 275 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ABCG5Q9H222 651 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 TMEM231Q9H6L2 316 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 RNF167Q9H6Y7 350 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 METTL17Q9H7H0 456 aaPredicted RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 RHOFQ9HBH0 211 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 NGBQ9NPG2 151 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 FAM206AQ9NX38 181 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 EXTL2Q9UBQ6 330 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF629Q9UEG4 869 aaPredicted RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 RAB22AQ9UL26 194 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 SLC7A11Q9UPY5 501 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 AK6Q9Y3D8 172 aaKnown RBP1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 MPC1Q9Y5U8 109 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 LHFPL6Q9Y693 200 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 MYO9BQ13459 2157 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 NAV2Q8IVL1 2488 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 EML5Q05BV3 1969 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 CEP295Q9C0D2 2601 aa1.83□□□□□ -2.12
TOPBP1-205ENST00000506779 HEATR5BQ9P2D3 2071 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ACACBO00763 2458 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 KMT2EQ8IZD2 1858 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 MYO18BQ8IUG5 2567 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 IGKV1D-43A0A0B4J1Z2 117 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 PIGBOS1A0A0B4J2F0 54 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 A0A0G2JMP0 313 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 A0A0X1KG70 313 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ZNF816-ZNF321PA0A0X1KG74 233 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 A0A1B0GTI1 187 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 FAM240BA0A1B0GVZ2 78 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 C5orf49A4QMS7 147 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 GGT3PA6NGU5 568 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 OR5B21A6NL26 309 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ANKRD30BLA7E2S9 258 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 SERPINE3A8MV23 424 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 J3QRK9 145 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 PIN1P1O15428 100 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 GSTZ1O43708 216 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 LANCL1O43813 399 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ORC5O43913 435 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 DHFRP00374 187 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CST4P01036 141 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 NRASP01111 189 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 IGLV3-1P01715 115 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 MMP7P09237 267 aaPredicted RBP1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 ACSM4P0C7M7 580 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CD79AP11912 226 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 GTF2F2P13984 249 aa1.82□□□□□ -2.12
TOPBP1-205ENST00000506779 CBR1P16152 277 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms