RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 GMEB1Q9Y692 573 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNF469Q96JG9 3925 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 TACC2O95359 2948 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 ABCA2Q9BZC7 2435 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 ANKHD1Q8IWZ3 2542 aaKnown RBP2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 ESPL1Q14674 2120 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 IGHV1-45A0A0A0MS14 117 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 TRAV17A0A0B4J275 112 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 A0A0G2JMM0 328 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 A0A1W2PPB8 328 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 A0A1W2PRS3 328 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 KIR3DP1A8MWS1 328 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 H0YGG7 62 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 H0YJW9 148 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 J3QT63 122 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNF593O00488 134 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 MED6O75586 246 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 FOXH1O75593 365 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 SERPINB7O75635 380 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 VAMP5O95183 116 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 SERPINA7P05543 415 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 IL12BP29460 328 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 COILP38432 576 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 CA7P43166 264 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 EMP2P54851 167 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 TAS2R31P59538 309 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 BASP1P80723 227 aaKnown RBP2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 C2orf80Q0P641 193 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 TMED2Q15363 201 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 TRIP13Q15645 432 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 C6orf99Q4VX62 202 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 ACSBG2Q5FVE4 666 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 HHATQ5VTY9 493 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 TMEM236Q5W0B7 351 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 PTRHD1Q6GMV3 140 aaKnown RBP2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 NANOGP8Q6NSW7 305 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZFP2Q6ZN57 461 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 C16orf47Q6ZP98 133 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 SSX6Q7RTT6 188 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 VN1R4Q7Z5H5 301 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 CRLF3Q8IUI8 442 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 ENTHD1Q8IYW4 607 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 TMEM256Q8N2U0 113 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR2L8Q8NGY9 312 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 DOK4Q8TEW6 326 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 C1orf54Q8WWF1 131 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 GHSRQ92847 366 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 MRPL48Q96GC5 212 aaKnown RBP2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNF414Q96IQ9 312 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 KCNS1Q96KK3 526 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNF285Q96NJ3 590 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 IP6K3Q96PC2 410 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 ALS2CR12Q96Q35 445 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR4K3Q96R72 315 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 VAT1Q99536 393 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 C20orf144Q9BQM9 153 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 BEX2Q9BXY8 128 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 WDR54Q9H977 334 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 EXOSC4Q9NPD3 245 aaKnown RBP2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 TMEM100Q9NV29 134 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 ENOPH1Q9UHY7 261 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 NXT1Q9UKK6 140 aaKnown RBP2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 RAB26Q9ULW5 256 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 WIF1Q9Y5W5 379 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 STAB1Q9NY15 2570 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 MED13Q9UHV7 2174 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 ACANP16112 2415 aa2.05□□□□□ -2.08
TRAPPC11-205ENST00000506426 VPS13CQ709C8 3753 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 IGLV3-12A0A075B6K2 115 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 TRAV8-6A0A0B4J262 113 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 C5orf63A6NC05 138 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR5H1A6NKK0 313 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 C4orf51C9J302 202 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 GOLGA8MH3BSY2 632 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 hCG_2039718K7EN88 272 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 M0R1B8 84 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 M0R1X1 148 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 RBFOX2O43251 390 aaKnown RBP eCLIP2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 SNAI2O43623 268 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 ENSAO43768 121 aaKnown RBP2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 BANF1O75531 89 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 GATBO75879 557 aaKnown RBP2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 SVILO95425 2214 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 FADS2O95864 444 aaKnown RBP2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 IGHV3-11P01762 117 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 TPM3P06753 285 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 IMPA1P29218 277 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 CMPK1P30085 196 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 RPA3P35244 121 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 KIR3DL2P43630 455 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 PSMB2P49721 201 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 RWDD2BP57060 319 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR12D2P58182 307 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 RAB8AP61006 207 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 TSPAN5P62079 268 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 TBPL1P62380 186 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 STX4Q12846 297 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 SPA17Q15506 151 aa2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 TOMM34Q15785 309 aaPredicted RBP2.04□□□□□ -2.08
TRAPPC11-205ENST00000506426 CDNFQ49AH0 187 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms