RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 FABP9Q0Z7S8 132 aa3□□□□□ -1.93
SUB1-202ENST00000502453 CEACAM16Q2WEN9 425 aa3□□□□□ -1.93
SUB1-202ENST00000502453 TMEM255AQ5JRV8 349 aa3□□□□□ -1.93
SUB1-202ENST00000502453 FAM24BQ8N5W8 94 aa3□□□□□ -1.93
SUB1-202ENST00000502453 TSTD1Q8NFU3 115 aa3□□□□□ -1.93
SUB1-202ENST00000502453 FNDC9Q8TBE3 224 aa3□□□□□ -1.93
SUB1-202ENST00000502453 RDH12Q96NR8 316 aa3□□□□□ -1.93
SUB1-202ENST00000502453 OR2M4Q96R27 311 aa3□□□□□ -1.93
SUB1-202ENST00000502453 ATOH8Q96SQ7 321 aa3□□□□□ -1.93
SUB1-202ENST00000502453 GPER1Q99527 375 aa3□□□□□ -1.93
SUB1-202ENST00000502453 RNASE7Q9H1E1 156 aaKnown RBP3□□□□□ -1.93
SUB1-202ENST00000502453 SPRR3Q9UBC9 169 aa3□□□□□ -1.93
SUB1-202ENST00000502453 IGLV1-36A0A0B4J1U3 117 aa3□□□□□ -1.93
SUB1-202ENST00000502453 TRAV39A0A0B4J263 110 aa3□□□□□ -1.93
SUB1-202ENST00000502453 PAEPP09466 180 aa3□□□□□ -1.93
SUB1-202ENST00000502453 FGF7P21781 194 aa3□□□□□ -1.93
SUB1-202ENST00000502453 HNRNPA3P51991 378 aaKnown RBP3□□□□□ -1.93
SUB1-202ENST00000502453 EMP1P54849 157 aa3□□□□□ -1.93
SUB1-202ENST00000502453 GP2P55259 537 aaKnown RBP3□□□□□ -1.93
SUB1-202ENST00000502453 IFITM3Q01628 133 aa3□□□□□ -1.93
SUB1-202ENST00000502453 PAFAH1B3Q15102 231 aaKnown RBP3□□□□□ -1.93
SUB1-202ENST00000502453 ACOT6Q3I5F7 207 aaPredicted RBP3□□□□□ -1.93
SUB1-202ENST00000502453 WDR38Q5JTN6 314 aa3□□□□□ -1.93
SUB1-202ENST00000502453 FAM183BPQ6ZVS7 135 aa3□□□□□ -1.93
SUB1-202ENST00000502453 OR10AD1Q8NGE0 317 aa3□□□□□ -1.93
SUB1-202ENST00000502453 OR10G8Q8NGN5 311 aa3□□□□□ -1.93
SUB1-202ENST00000502453 OR10G7Q8NGN6 311 aa3□□□□□ -1.93
SUB1-202ENST00000502453 C9orf85Q96MD7 179 aa3□□□□□ -1.93
SUB1-202ENST00000502453 RNF126Q9BV68 326 aa3□□□□□ -1.93
SUB1-202ENST00000502453 C10orf71Q711Q0 1435 aa3□□□□□ -1.93
SUB1-202ENST00000502453 ZNF106Q9H2Y7 1883 aaKnown RBP3□□□□□ -1.93
SUB1-202ENST00000502453 TRAV8-6A0A0B4J262 113 aa3□□□□□ -1.93
SUB1-202ENST00000502453 ZNF850A8MQ14 1090 aa3□□□□□ -1.93
SUB1-202ENST00000502453 B4DXG7 233 aa3□□□□□ -1.93
SUB1-202ENST00000502453 C12orf77C9JDV5 145 aa3□□□□□ -1.93
SUB1-202ENST00000502453 CDX4O14627 284 aaPredicted RBP3□□□□□ -1.93
SUB1-202ENST00000502453 ZNF682O95780 498 aa3□□□□□ -1.93
SUB1-202ENST00000502453 FABP3P05413 133 aa3□□□□□ -1.93
SUB1-202ENST00000502453 MED14OSP0DP75 135 aa3□□□□□ -1.93
SUB1-202ENST00000502453 RCC1P18754 421 aaPredicted RBP3□□□□□ -1.93
SUB1-202ENST00000502453 PRSS3P35030 304 aa3□□□□□ -1.93
SUB1-202ENST00000502453 PFN2P35080 140 aa3□□□□□ -1.93
SUB1-202ENST00000502453 CRYBA2P53672 197 aa3□□□□□ -1.93
SUB1-202ENST00000502453 RPS23P62266 143 aaKnown RBP3□□□□□ -1.93
SUB1-202ENST00000502453 IHHQ14623 411 aa3□□□□□ -1.93
SUB1-202ENST00000502453 RGNQ15493 299 aa3□□□□□ -1.93
SUB1-202ENST00000502453 FA2HQ7L5A8 372 aa3□□□□□ -1.93
SUB1-202ENST00000502453 ZNF433Q8N7K0 673 aaPredicted RBP3□□□□□ -1.93
SUB1-202ENST00000502453 OR13A1Q8NGR1 328 aa3□□□□□ -1.93
SUB1-202ENST00000502453 OR2K2Q8NGT1 345 aa3□□□□□ -1.93
SUB1-202ENST00000502453 GEMIN6Q8WXD5 167 aaKnown RBP3□□□□□ -1.93
SUB1-202ENST00000502453 DOHHQ9BU89 302 aa3□□□□□ -1.93
SUB1-202ENST00000502453 SLC17A9Q9BYT1 436 aa3□□□□□ -1.93
SUB1-202ENST00000502453 ZNF696Q9H7X3 374 aa3□□□□□ -1.93
SUB1-202ENST00000502453 PCYOX1Q9UHG3 505 aa3□□□□□ -1.93
SUB1-202ENST00000502453 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3□□□□□ -1.93
SUB1-202ENST00000502453 TTC3P53804 2025 aa3□□□□□ -1.93
SUB1-202ENST00000502453 TRAV8-2A0A0B4J237 113 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 RBFOX2O43251 390 aaKnown RBP eCLIP2.99□□□□□ -1.93
SUB1-202ENST00000502453 KBTBD11O94819 623 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 GYPCP04921 128 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 PRSS2P07478 247 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 IL7P13232 177 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 MYCNOSP40205 109 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 LINC00310P59036 64 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 RPS28P62857 69 aaKnown RBP2.99□□□□□ -1.93
SUB1-202ENST00000502453 HTR4Q13639 388 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 JOSD1Q15040 202 aaPredicted RBP2.99□□□□□ -1.93
SUB1-202ENST00000502453 PMVKQ15126 192 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 C1orf158Q8N1D5 194 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 OR5W2Q8NH69 310 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 ZNRF4Q8WWF5 429 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 MBD3L1Q8WWY6 194 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 LCN9Q8WX39 176 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 DEDD2Q8WXF8 326 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 LINC00476Q8WZB0 136 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 TMEM101Q96IK0 257 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 LXNQ9BS40 222 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 PRO1933Q9H354 126 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 POPDC3Q9HBV1 291 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 ZNF331Q9NQX6 463 aaPredicted RBP2.99□□□□□ -1.93
SUB1-202ENST00000502453 RBFOX1Q9NWB1 397 aaKnown RBP2.99□□□□□ -1.93
SUB1-202ENST00000502453 TAAR2Q9P1P5 351 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 BLMP54132 1417 aaPredicted RBP2.99□□□□□ -1.93
SUB1-202ENST00000502453 DLC1Q96QB1 1528 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 PLCH1Q4KWH8 1693 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 NRASP01111 189 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 OPN1SWP03999 348 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 IL2RGP31785 369 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 GABRA2P47869 451 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 RAB5BP61020 215 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 SELENOWP63302 87 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 HIST1H1AQ02539 215 aaPredicted RBP2.99□□□□□ -1.93
SUB1-202ENST00000502453 SRSF4Q08170 494 aaKnown RBP2.99□□□□□ -1.93
SUB1-202ENST00000502453 EBPQ15125 230 aaKnown RBP2.99□□□□□ -1.93
SUB1-202ENST00000502453 LRRTM1Q86UE6 522 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 OR10D3Q8NH80 312 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 PRSS3P2Q8NHM4 247 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 KLK6Q92876 244 aa2.99□□□□□ -1.93
SUB1-202ENST00000502453 UQCC1Q9NVA1 299 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms