RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CACNA1GO43497 2377 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 PIGBOS1A0A0B4J2F0 54 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 A0A1W2PPE3 182 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 SCAF4O95104 1147 aaKnown RBP8.3□□□□□ -1.08
CLIP1-204ENST00000501271 TFF1P04155 84 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 METTL15P1P0C7V9 234 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 RAB5AP20339 215 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 AGAP20933 346 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 CEBPGP53567 150 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 RPS23P62266 143 aaKnown RBP8.3□□□□□ -1.08
CLIP1-204ENST00000501271 GUSBP1Q15486 140 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 ZNF826PQ6ZT77 177 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 Q6ZT83 130 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 FAM214BQ7L5A3 538 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 CYB561D1Q8N8Q1 229 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 CLDND2Q8NHS1 167 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 HES4Q9HCC6 221 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 PSENENQ9NZ42 101 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 NBEAQ8NFP9 2946 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 CACNA1DQ01668 2161 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 H3BQ15 152 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 NKX2-8O15522 239 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 AGFG2O95081 481 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 IFNA5P01569 189 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 IGHG3P01860 377 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 IFNA4P05014 189 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 ZNF806P0C7X5 589 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 TLE4Q04727 773 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 TRIP6Q15654 476 aaKnown RBP8.3□□□□□ -1.08
CLIP1-204ENST00000501271 ZNF506Q5JVG8 444 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 SLC25A24Q6NUK1 477 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 VWA1Q6PCB0 445 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 ZNF525Q8N782 197 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 CNEP1R1Q8N9A8 125 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 FDCSPQ8NFU4 85 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 OR1L1Q8NH94 360 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 SNIP1Q8TAD8 396 aaKnown RBP8.3□□□□□ -1.08
CLIP1-204ENST00000501271 C5orf30Q96GV9 206 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 VSIRQ9H7M9 311 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 OBP2BQ9NPH6 170 aa8.3□□□□□ -1.08
CLIP1-204ENST00000501271 C5orf52A6NGY3 159 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 TMEM210A6NLX4 147 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 C12orf77C9JDV5 145 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 ATXN7O15265 892 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-204ENST00000501271 EIF3GO75821 320 aaKnown RBP eCLIP8.29□□□□□ -1.08
CLIP1-204ENST00000501271 OR3A1P47881 315 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 INO80CQ6PI98 192 aaPredicted RBP8.29□□□□□ -1.08
CLIP1-204ENST00000501271 DPPA3Q6W0C5 159 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 Q6ZR03 302 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 C11orf53Q8IXP5 236 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 RAB39BQ96DA2 213 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 YPEL4Q96NS1 127 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 HIPK2Q9H2X6 1198 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 INTS1Q8N201 2190 aaKnown RBP8.29□□□□□ -1.08
CLIP1-204ENST00000501271 BOD1L1Q8NFC6 3051 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 C1QTNF9BB2RNN3 333 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 RAMP3O60896 148 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 IGKV3-15P01624 115 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 HSPB1P04792 205 aaKnown RBP8.29□□□□□ -1.08
CLIP1-204ENST00000501271 CBR1P16152 277 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 CD200P41217 278 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 CCL11P51671 97 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 EIF2S3LQ2VIR3 472 aaKnown RBP8.29□□□□□ -1.08
CLIP1-204ENST00000501271 SSX7Q7RTT5 188 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 ZNF561Q8N587 486 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 RBMXL1Q96E39 390 aaKnown RBP8.29□□□□□ -1.08
CLIP1-204ENST00000501271 OR2D2Q9H210 308 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 RPRMQ9NS64 109 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 RNF150Q9ULK6 438 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 FZR1Q9UM11 496 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 PTPRBP23467 1997 aa8.29□□□□□ -1.08
CLIP1-204ENST00000501271 DMXL1Q9Y485 3027 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 DOCK11Q5JSL3 2073 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 TMEM30CPA0ZSE6 113 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 HBE1P02100 147 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 ACAA1P09110 424 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-204ENST00000501271 KIR2DL2P43627 348 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-204ENST00000501271 MEOX2P50222 304 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 AESQ08117 197 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 ZNF726P1Q15940 193 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 OR2B11Q5JQS5 317 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 PRAMEF6Q5VXH4 476 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 ADAM5Q6NVV9 412 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 FGFRL1Q8N441 504 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 ZNF645Q8N7E2 425 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 WDR31Q8NA23 367 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 C9orf106Q8NAJ2 232 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 OR52L2PQ8NGH6 319 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 PRR7Q8TB68 274 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 COQ2Q96H96 371 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 UNKLQ9H9P5 680 aaKnown RBP8.28□□□□□ -1.08
CLIP1-204ENST00000501271 TRAV1-1A0A0B4J248 108 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 LOC102723971A0A1B0GUV8 181 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 ZNF727A8MUV8 499 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 UBE2CO00762 179 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 OR2C1O95371 312 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 WT1P19544 449 aaPredicted RBP8.28□□□□□ -1.08
CLIP1-204ENST00000501271 COX5AP20674 150 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 OR2B8PP59922 312 aa8.28□□□□□ -1.08
CLIP1-204ENST00000501271 RPL30P62888 115 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms