RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 TMEM219Q86XT9 240 aa13.48□□□□□ -0.25
PRKCB-210ENST00000498739 OR2AK2Q8NG84 335 aa13.48□□□□□ -0.25
PRKCB-210ENST00000498739 RAB2BQ8WUD1 216 aa13.48□□□□□ -0.25
PRKCB-210ENST00000498739 NUDCD2Q8WVJ2 157 aa13.48□□□□□ -0.25
PRKCB-210ENST00000498739 S100A16Q96FQ6 103 aaKnown RBP13.48□□□□□ -0.25
PRKCB-210ENST00000498739 ABCG5Q9H222 651 aa13.48□□□□□ -0.25
PRKCB-210ENST00000498739 RAB18Q9NP72 206 aa13.48□□□□□ -0.25
PRKCB-210ENST00000498739 COMMD3Q9UBI1 195 aa13.48□□□□□ -0.25
PRKCB-210ENST00000498739 A0A1W2PPI3 338 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 A6NDX4 124 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 TIMM23O14925 209 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 FABP7O15540 132 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 CHST1O43916 411 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 NOL3O60936 208 aaKnown RBP13.47□□□□□ -0.25
PRKCB-210ENST00000498739 GAPDHP04406 335 aaKnown RBP13.47□□□□□ -0.25
PRKCB-210ENST00000498739 DTYMKP23919 212 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 ZBTB25P24278 435 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 PITPNAQ00169 270 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 ZNF816Q0VGE8 651 aaPredicted RBP13.47□□□□□ -0.25
PRKCB-210ENST00000498739 SPCS2Q15005 226 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 PNLIPRP3Q17RR3 467 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 AWAT1Q58HT5 328 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 OR8H3Q8N146 312 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 LYG1Q8N1E2 194 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 DTX3Q8N9I9 347 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 OR4A4PQ8NGN8 299 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 CAPSLQ8WWF8 208 aa13.47□□□□□ -0.25
PRKCB-210ENST00000498739 IGKV1-6A0A0C4DH72 117 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 NDUFA7O95182 113 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 LPLP06858 475 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 GSTT2P0CG29 244 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 GSTT2BP0CG30 244 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 MDKP21741 143 aaPredicted RBP13.46□□□□□ -0.25
PRKCB-210ENST00000498739 CEACAM6P40199 344 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 COMPP49747 757 aaPredicted RBP13.46□□□□□ -0.25
PRKCB-210ENST00000498739 TMBIM6P55061 237 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 LY6G6FQ5SQ64 297 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 Q6ZSV7 163 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 MOB3BQ86TA1 216 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 DRAM1Q8N682 238 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 OR4F5Q8NH21 305 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 OR56B4Q8NH76 319 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 RTN4IP1Q8WWV3 396 aaPredicted RBP13.46□□□□□ -0.25
PRKCB-210ENST00000498739 ACOT12Q8WYK0 555 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 AP3S1Q92572 193 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 ST6GALNAC6Q969X2 333 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 ST6GALNAC5Q9BVH7 336 aa13.46□□□□□ -0.25
PRKCB-210ENST00000498739 IGHV1-3A0A0C4DH29 117 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 BET1O15155 118 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 ST8SIA5O15466 376 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 SSX5O60225 188 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 EIF4EP06730 217 aaKnown RBP13.45□□□□□ -0.26
PRKCB-210ENST00000498739 ZNF182P17025 639 aaPredicted RBP13.45□□□□□ -0.26
PRKCB-210ENST00000498739 ZNF137PP52743 207 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 HERPUD1Q15011 391 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 SRSF7Q16629 238 aaKnown RBP eCLIP13.45□□□□□ -0.268e-14■■■■■ 44.3
PRKCB-210ENST00000498739 IGSF11Q5DX21 431 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 MZT2AQ6P582 158 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 TGIF2LXQ8IUE1 241 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 CFHR4Q92496 578 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 BCL7BQ9BQE9 202 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 CABLES2Q9BTV7 478 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 PARP12Q9H0J9 701 aaKnown RBP13.45□□□□□ -0.26
PRKCB-210ENST00000498739 AUNIPQ9H7T9 357 aa13.45□□□□□ -0.26
PRKCB-210ENST00000498739 IGKV1D-8A0A087WSZ0 117 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 TXNL1O43396 289 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 XRCC3O43542 346 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 SNRNP70P08621 437 aaKnown RBP13.44□□□□□ -0.26
PRKCB-210ENST00000498739 FAM106CPP0CH98 169 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 PTHLHP12272 177 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 SOX6P35712 828 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 HES1Q14469 280 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 FBLN7Q53RD9 439 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 TMEM69Q5SWH9 247 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 Q6ZS49 121 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 ODF3L1Q8IXM7 274 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 EDARADDQ8WWZ3 215 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 NPFFR1Q9GZQ6 430 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 IFI27L2Q9H2X8 130 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 BEX1Q9HBH7 125 aa13.44□□□□□ -0.26
PRKCB-210ENST00000498739 SAA2-SAA4A0A096LPE2 208 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 IGHV3-72A0A0B4J1Y9 119 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 FAM90A9PA6NNJ1 464 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 LANCL1O43813 399 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 HPGDSO60760 199 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 TSPAN9O75954 239 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 SAA2P0DJI9 122 aaPredicted RBP13.43□□□□□ -0.26
PRKCB-210ENST00000498739 TAS2R20P59543 309 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 OR4C13Q8NGP0 309 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 OR10J5Q8NHC4 309 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 ISOC1Q96CN7 298 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 CMTM3Q96MX0 182 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 SLC25A33Q9BSK2 321 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 C11orf54Q9H0W9 315 aaPredicted RBP13.43□□□□□ -0.26
PRKCB-210ENST00000498739 RDH8Q9NYR8 311 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 PIPOXQ9P0Z9 390 aa13.43□□□□□ -0.26
PRKCB-210ENST00000498739 TRBV6-7A0A0A0MS04 114 aa13.42□□□□□ -0.26
PRKCB-210ENST00000498739 A0A1B0GUS0 222 aa13.42□□□□□ -0.26
PRKCB-210ENST00000498739 CLPSL1A2RUU4 121 aa13.42□□□□□ -0.26
PRKCB-210ENST00000498739 CCDC160A6NGH7 325 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms