RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 RPSAP08865 295 aaKnown RBP6.93□□□□□ -1.3
CCDC171-209ENST00000498725 CD40LGP29965 261 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 CCR9P51686 369 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 DYRK1AQ13627 763 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 FLOT2Q14254 428 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 MORN2Q502X0 79 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 ZNF660Q6AZW8 331 aaPredicted RBP6.93□□□□□ -1.3
CCDC171-209ENST00000498725 GLDNQ6ZMI3 551 aaPredicted RBP6.93□□□□□ -1.3
CCDC171-209ENST00000498725 KCTD20Q7Z5Y7 419 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 LHFPL3Q86UP9 236 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 ODF3L1Q8IXM7 274 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 NPBQ8NG41 125 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 OR5T1Q8NG75 326 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 OR9G4Q8NGQ1 327 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 OR5AK2Q8NH90 309 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 RFKQ969G6 155 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 NRBF2Q96F24 287 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 CPNE2Q96FN4 548 aaPredicted RBP6.93□□□□□ -1.3
CCDC171-209ENST00000498725 PDCD1LG2Q9BQ51 273 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 ABHD14AQ9BUJ0 271 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 RANGRFQ9HD47 186 aaPredicted RBP6.93□□□□□ -1.3
CCDC171-209ENST00000498725 SELENOKQ9Y6D0 94 aa6.93□□□□□ -1.3
CCDC171-209ENST00000498725 UBE2QL1A1L167 161 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 MCRIP1C9JLW8 97 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 H7C2Y5 167 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 RRHO14718 337 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 NDUFA3O95167 84 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 CNIH1O95406 144 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 GSTP1P09211 210 aaKnown RBP6.92□□□□□ -1.3
CCDC171-209ENST00000498725 CD7P09564 240 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 ZP3P21754 424 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 CRIP2P52943 208 aaPredicted RBP6.92□□□□□ -1.3
CCDC171-209ENST00000498725 GYS2P54840 703 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 Q3ZCU0 254 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 SLC22A6Q4U2R8 563 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 C6orf183Q5T699 404 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 KDM4DQ6B0I6 523 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 PYHIN1Q6K0P9 492 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 IL34Q6ZMJ4 242 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 Q8N402 240 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 PARP16Q8N5Y8 322 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 TCTEX1D1Q8N7M0 179 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 GRPEL2Q8TAA5 225 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 RGP1Q92546 391 aaPredicted RBP6.92□□□□□ -1.3
CCDC171-209ENST00000498725 ORAI1Q96D31 301 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 CIB1Q99828 191 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 NEURL2Q9BR09 285 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 THAP7Q9BT49 309 aaPredicted RBP6.92□□□□□ -1.3
CCDC171-209ENST00000498725 SRD5A3Q9H8P0 318 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 ISG20L2Q9H9L3 353 aaKnown RBP6.92□□□□□ -1.3
CCDC171-209ENST00000498725 TAF9BQ9HBM6 251 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 RAB9BQ9NP90 201 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 RNF150Q9ULK6 438 aa6.92□□□□□ -1.3
CCDC171-209ENST00000498725 HERC2O95714 4834 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 SAA2-SAA4A0A096LPE2 208 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 E9PI62 339 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 ARPC1BO15143 372 aaKnown RBP6.91□□□□□ -1.3
CCDC171-209ENST00000498725 CA2P00918 260 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 TRBV12-3P01733 135 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 MAS1P04201 325 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 CSN3P07498 182 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 SAA2P0DJI9 122 aaPredicted RBP6.91□□□□□ -1.3
CCDC171-209ENST00000498725 GNGT1P63211 74 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 KLF5Q13887 457 aaPredicted RBP6.91□□□□□ -1.3
CCDC171-209ENST00000498725 GUCA2BQ16661 112 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 MPV17LQ2QL34 196 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 DDI2Q5TDH0 399 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 RAB12Q6IQ22 244 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 CD200R1LQ6Q8B3 271 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 ASCL4Q6XD76 172 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 LINC00322Q6ZN03 302 aaPredicted RBP6.91□□□□□ -1.3
CCDC171-209ENST00000498725 AMIGO2Q86SJ2 522 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 OR8J1Q8NGP2 316 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 SLA2Q9H6Q3 261 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 IFT22Q9H7X7 185 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 METTL1Q9UBP6 276 aaKnown RBP6.91□□□□□ -1.3
CCDC171-209ENST00000498725 AASSQ9UDR5 926 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 PEX16Q9Y5Y5 336 aa6.91□□□□□ -1.3
CCDC171-209ENST00000498725 TCRBV3S1A0A5B6 114 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 TMEM212A6NML5 194 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 OR11H12B2RN74 326 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 TFAP2AP05549 437 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 T-ENOLP0DO92 83 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 CALB2P22676 271 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 ZNF93P35789 620 aaPredicted RBP6.9□□□□□ -1.3
CCDC171-209ENST00000498725 EWSR1Q01844 656 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCDC171-209ENST00000498725 TMED1Q13445 227 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 RPEL1Q2QD12 228 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 AKIRIN2Q53H80 203 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 RPL39P5Q59GN2 51 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 NHLRC3Q5JS37 347 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 ZNF833PQ6ZTB9 187 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 LINC00596Q86U02 117 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 SVOPQ8N4V2 548 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 ACBD7Q8N6N7 88 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 ALG8Q9BVK2 526 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 PARP12Q9H0J9 701 aaKnown RBP6.9□□□□□ -1.3
CCDC171-209ENST00000498725 BANF2Q9H503 90 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 MED4Q9NPJ6 270 aa6.9□□□□□ -1.3
CCDC171-209ENST00000498725 IMPAD1Q9NX62 359 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms