RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CCDC121Q6ZUS5 278 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 TMEM75Q8N9X5 138 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 OR10A6Q8NH74 314 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 SPACA4Q8TDM5 124 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 TMIGD2Q96BF3 282 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 MSANTD3Q96H12 275 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 RETNLBQ9BQ08 111 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 CHST5Q9GZS9 411 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 CYSTM1Q9H1C7 97 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 NDUFB11Q9NX14 153 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 DOK5Q9P104 306 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 PRO2289Q9P1D8 64 aa0.7□□□□□ -2.3
SMC4-227ENST00000497984 EFCAB9A8MZ26 197 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 BRI3O95415 125 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 SNAP29O95721 258 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 IVLP07476 585 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 SLC25A16P16260 332 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 ATF1P18846 271 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 ORM2P19652 201 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 GADD45AP24522 165 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 PEBP1P30086 187 aaKnown RBP0.69□□□□□ -2.3
SMC4-227ENST00000497984 PSMB3P49720 205 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 TSPEAR-AS2P59090 65 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 STX3Q13277 289 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 ZBTB6Q15916 424 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 TRMT12Q53H54 448 aaKnown RBP0.69□□□□□ -2.3
SMC4-227ENST00000497984 MTERF4Q7Z6M4 381 aaKnown RBP0.69□□□□□ -2.3
SMC4-227ENST00000497984 OR4P4Q8NGL7 312 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 MGLLQ99685 303 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 CDCA4Q9BXL8 241 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 PSMD13Q9UNM6 376 aa0.69□□□□□ -2.3
SMC4-227ENST00000497984 DHRS12A0PJE2 317 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 ARRDC5A6NEK1 342 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 C11orf86A6NJI1 115 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 H3BPC8 53 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 GP1BAP07359 652 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 SLC35E2BP0CK96 405 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 LIMS3P0CW19 117 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 LIMS4P0CW20 117 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 CDK2P24941 298 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 RCVRNP35243 200 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 KCNJ3P48549 501 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 LINC00313P59037 77 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 ACTBP60709 375 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 FGF12P61328 243 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 ACTG1P63261 375 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 AGTRAPQ6RW13 159 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 C2orf91Q6ZV80 131 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 OR4X2Q8NGF9 303 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 OR5K1Q8NHB7 308 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 TAMM41Q96BW9 452 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 MRPS24Q96EL2 167 aaKnown RBP0.68□□□□□ -2.3
SMC4-227ENST00000497984 FAM210AQ96ND0 272 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 SERPINB11Q96P15 392 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 HBEGFQ99075 208 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 SIKE1Q9BRV8 207 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 MED18Q9BUE0 208 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 TIMM21Q9BVV7 248 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 TMEM216Q9P0N5 145 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 LINC00527Q9UJ94 153 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 FIS1Q9Y3D6 152 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 ALG5Q9Y673 324 aa0.68□□□□□ -2.3
SMC4-227ENST00000497984 CLUHO75153 1309 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 YLPM1P49750 1951 aaKnown RBP0.67□□□□□ -2.3
SMC4-227ENST00000497984 A0A1B0GVG6 124 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 MDFIC2A0A1B0GVS7 189 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 LINC00862A6NCI5 91 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 J3QQQ9 107 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 CCL3P10147 92 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 NQO2P16083 231 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 CRHBPP24387 322 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 OPRM1P35372 400 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 PSMD7P51665 324 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 RPL26P61254 145 aaKnown RBP0.67□□□□□ -2.3
SMC4-227ENST00000497984 FAM3AP98173 230 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 GTF2BQ00403 316 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 GLT6D1Q7Z4J2 308 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 SLC35F6Q8N357 371 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 ZNF283Q8N7M2 679 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 RORBQ92753 470 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 FGF13Q92913 245 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 CCDC127Q96BQ5 260 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 TMEM56Q96MV1 263 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 TRNT1Q96Q11 434 aaKnown RBP0.67□□□□□ -2.3
SMC4-227ENST00000497984 MND1Q9BWT6 205 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 MED28Q9H204 178 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 AGPAT3Q9NRZ7 376 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 BABAM2Q9NXR7 383 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 COMMD9Q9P000 198 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 RPL26L1Q9UNX3 145 aaKnown RBP0.67□□□□□ -2.3
SMC4-227ENST00000497984 MALRD1Q5VYJ5 2156 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 MED13Q9UHV7 2174 aa0.67□□□□□ -2.3
SMC4-227ENST00000497984 SDK1Q7Z5N4 2213 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 COL6A6A6NMZ7 2263 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 IGHV3-15A0A0B4J1V0 119 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 LOC100506127A0A0U1RQW1 187 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 M0QYV0 167 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 SULT1C2O00338 296 aa0.66□□□□□ -2.3
SMC4-227ENST00000497984 UBFD1O14562 309 aaKnown RBP0.66□□□□□ -2.3
SMC4-227ENST00000497984 PHYHO14832 338 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms