RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, human

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3C-208	ENST00000497368	ZNF107	Q9UII5	783 aa	Predicted RBP	4.28	□□□□□ -1.72
UBE3C-208	ENST00000497368	LSM2	Q9Y333	95 aa	Known RBP	4.28	□□□□□ -1.72
UBE3C-208	ENST00000497368	LSM4	Q9Y4Z0	139 aa	Known RBP	4.28	□□□□□ -1.72
UBE3C-208	ENST00000497368	PCDHGB5	Q9Y5G0	923 aa		4.28	□□□□□ -1.72
UBE3C-208	ENST00000497368	VPS13D	Q5THJ4	4388 aa		4.28	□□□□□ -1.73
UBE3C-208	ENST00000497368	KMT2A	Q03164	3969 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	TMEM30CP	A0ZSE6	113 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	SOX15	O60248	233 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	PROP1	O75360	226 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR7C1	O76099	320 aa	Predicted RBP	4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	FADS2	O95864	444 aa	Known RBP	4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	HBZ	P02008	142 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	CD37	P11049	281 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	PSMB8	P28062	276 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	C21orf33	P30042	268 aa	Predicted RBP	4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	PPIF	P30405	207 aa	Known RBP	4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	BDKRB2	P30411	391 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	BRS3	P32247	399 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	ZNF93	P35789	620 aa	Predicted RBP	4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	KCNJ3	P48549	501 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	RASSF2	P50749	326 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	RAB7A	P51149	207 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	GBX2	P52951	348 aa	Predicted RBP	4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	SLC35A2	P78381	396 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	QRFP	P83859	136 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	MRPL28	Q13084	256 aa	Known RBP	4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	PLA2G7	Q13093	441 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	MADCAM1	Q13477	382 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	HNF4G	Q14541	408 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	MPV17L	Q2QL34	196 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	CCDC58	Q4VC31	144 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	C9orf152	Q5JTZ5	239 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR10K2	Q6IF99	312 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	ZNF880	Q6PDB4	577 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	LRRTM1	Q86UE6	522 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	SATL1	Q86VE3	508 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	TGIF2LX	Q8IUE1	241 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	KLHL30-AS1	Q8NEE0	82 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR4X2	Q8NGF9	303 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR10V1	Q8NGI7	309 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR52M1	Q8NGK5	317 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR5D14	Q8NGL3	314 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR4K15	Q8NH41	348 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR52N1	Q8NH53	320 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	GPR148	Q8TDV2	347 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	GHSR	Q92847	366 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	ARL11	Q969Q4	196 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	C5orf30	Q96GV9	206 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	S1PR3	Q99500	378 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	B9D2	Q9BPU9	175 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	NABP2	Q9BQ15	211 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	SULT4A1	Q9BR01	284 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	AIFM2	Q9BRQ8	373 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	MRPL20	Q9BYC9	149 aa	Known RBP	4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	ABCG5	Q9H222	651 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	KLK15	Q9H2R5	256 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	IFI27L2	Q9H2X8	130 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	BANF2	Q9H503	90 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	LIN7C	Q9NUP9	197 aa	Known RBP	4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	ZNF580	Q9UK33	172 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	RPL36	Q9Y3U8	105 aa	Known RBP	4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	TENM2	Q9NT68	2774 aa		4.27	□□□□□ -1.73
UBE3C-208	ENST00000497368	TRGV11	A0A075B6L2	103 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	IGHV7-81	A0A0B4J1V7	117 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	PNMA8C	A0A1B0GUJ8	204 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368		A0A1W2PPK0	400 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	FUOM	A2VDF0	154 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	SERPINE3	A8MV23	424 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368		G3V318	75 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368		I3L521	148 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368		M0QZK8	103 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	CCRL2	O00421	344 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	SDCBP	O00560	298 aa	Predicted RBP	4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	TOR1A	O14656	332 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	CASQ2	O14958	399 aa	Predicted RBP	4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	ATP6V0E1	O15342	81 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	ORC5	O43913	435 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	MPZL2	O60487	215 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	NDUFA3	O95167	84 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	IGHG4	P01861	327 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	RPSA	P08865	295 aa	Known RBP	4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	OCM2	P0CE71	109 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	DCK	P27707	260 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	CHAT	P28329	748 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	CEACAM3	P40198	252 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	OR3A3	P47888	321 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	PRRX1	P54821	245 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	GNB1	P62873	340 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	RIPK1	Q13546	671 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	IRF3	Q14653	427 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	RSU1	Q15404	277 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	HMGN3	Q15651	99 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	LRRC36	Q1X8D7	754 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	MRGPRG-AS1	Q2M3A8	158 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368		Q499Y3	187 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	SLC22A6	Q4U2R8	563 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	KHDC1L	Q5JSQ8	128 aa		4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.26	□□□□□ -1.73
UBE3C-208	ENST00000497368	RAB12	Q6IQ22	244 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms