RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ZNF69Q9UC07 566 aa17.72■□□□□ 0.43
C9orf3-222ENST00000496567 CDC42EP3Q9UKI2 254 aa17.72■□□□□ 0.43
C9orf3-222ENST00000496567 IGHV3OR16-10A0A075B7F0 116 aa17.71■□□□□ 0.43
C9orf3-222ENST00000496567 ODF3BA8MYP8 253 aa17.71■□□□□ 0.43
C9orf3-222ENST00000496567 PMP2P02689 132 aa17.71■□□□□ 0.43
C9orf3-222ENST00000496567 OR5H8P0DN80 308 aa17.71■□□□□ 0.43
C9orf3-222ENST00000496567 DCTN2Q13561 401 aaKnown RBP17.71■□□□□ 0.43
C9orf3-222ENST00000496567 MIDNQ504T8 468 aa17.71■□□□□ 0.43
C9orf3-222ENST00000496567 OVCH2Q7RTZ1 564 aa17.71■□□□□ 0.43
C9orf3-222ENST00000496567 LINC00311Q8N616 119 aa17.71■□□□□ 0.43
C9orf3-222ENST00000496567 BEX2Q9BXY8 128 aa17.71■□□□□ 0.43
C9orf3-222ENST00000496567 MMP28Q9H239 520 aa17.71■□□□□ 0.43
C9orf3-222ENST00000496567 RDH8Q9NYR8 311 aa17.71■□□□□ 0.43
C9orf3-222ENST00000496567 EHFQ9NZC4 300 aa17.71■□□□□ 0.43
C9orf3-222ENST00000496567 HIVEP2P31629 2446 aa17.71■□□□□ 0.43
C9orf3-222ENST00000496567 A0A1W2PRD5 423 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 A0A1W2PRF3 423 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 A0A1W2PRM7 423 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 ITGB1BP1O14713 200 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 NPFFO15130 113 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 LANCL1O43813 399 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 IGLV1-47P01700 117 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 AP3S2P59780 193 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 SLC25A48Q6ZT89 311 aaKnown RBP17.7■□□□□ 0.42
C9orf3-222ENST00000496567 IL17RELQ6ZVW7 336 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 H1FOOQ8IZA3 346 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-222ENST00000496567 ZNF439Q8NDP4 499 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 TRIM63Q969Q1 353 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 CREB3L1Q96BA8 519 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 AMMECR1Q9Y4X0 333 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-222ENST00000496567 SVEP1Q4LDE5 3571 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 ANKRD20A5PA0PJZ0 165 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 CD3DP04234 171 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 RFX2P48378 723 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 RAB7AP51149 207 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 DYRK1AQ13627 763 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 HLA-DRB5Q30154 266 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 RNASE10Q5GAN6 216 aaKnown RBP17.7■□□□□ 0.42
C9orf3-222ENST00000496567 TRIQKQ629K1 86 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 BRD3OSQ6XYD6 125 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 OR10X1Q8NGY0 326 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 ABHD14AQ9BUJ0 271 aa17.7■□□□□ 0.42
C9orf3-222ENST00000496567 MS4A7Q9GZW8 240 aaPredicted RBP17.7■□□□□ 0.42
C9orf3-222ENST00000496567 TBL2Q9Y4P3 447 aaKnown RBP17.7■□□□□ 0.42
C9orf3-222ENST00000496567 A0A1W2PPE3 182 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 CD74P04233 296 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 INPP1P49441 399 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 ZNF134P52741 427 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 CT45A1Q5HYN5 189 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 VAX1Q5SQQ9 334 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 MINOS1Q5TGZ0 78 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 STEAP1BQ6NZ63 245 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 C16orf87Q6PH81 154 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 TOMM5Q8N4H5 51 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 OR4P4Q8NGL7 312 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 CT45A3Q8NHU0 189 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 FAM216AQ8WUB2 273 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 CCDC32Q9BV29 185 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 MINOS1-NBL1R4GNA1 71 aa17.69■□□□□ 0.42
C9orf3-222ENST00000496567 INAFM1C9JVW0 142 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 IFNA6P05013 189 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 AKAIN1P0CW23 69 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 NFYAP23511 347 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-222ENST00000496567 HTR1DP28221 377 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 FCGR2CP31995 323 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 SAA4P35542 130 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 SCGB2A2Q13296 93 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 MEF2DQ14814 521 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 BAK1Q16611 211 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 RUSC1-AS1Q66K80 236 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 PIP4P2Q8N4L2 257 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 GIMAP1Q8WWP7 306 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 C11orf54Q9H0W9 315 aaPredicted RBP17.68■□□□□ 0.42
C9orf3-222ENST00000496567 GHITMQ9H3K2 345 aa17.68■□□□□ 0.42
C9orf3-222ENST00000496567 BUB1B-PAK6H3BSN5 160 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 M0QYG6 137 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 SLC31A2O15432 143 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 RAB3DO95716 219 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 IL3RAP26951 378 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 CEACAM3P40198 252 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 TSPAN5P62079 268 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 IFITM3Q01628 133 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 DHRS11Q6UWP2 260 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 C9orf139Q6ZV77 190 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 DEDD2Q8WXF8 326 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 PARP12Q9H0J9 701 aaKnown RBP17.67■□□□□ 0.42
C9orf3-222ENST00000496567 ABCB10Q9NRK6 738 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 DPM3Q9P2X0 92 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 OR2W1Q9Y3N9 320 aa17.67■□□□□ 0.42
C9orf3-222ENST00000496567 RBM7Q9Y580 266 aaKnown RBP17.67■□□□□ 0.42
C9orf3-222ENST00000496567 LEUTXA8MZ59 168 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 TUSC2O75896 110 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 EPHA1P21709 976 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 TMEM17Q86X19 198 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 OR6F1Q8NGZ6 308 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 TINAGL1Q9GZM7 467 aaPredicted RBP17.66■□□□□ 0.42
C9orf3-222ENST00000496567 ST8SIA5O15466 376 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 UPK1BO75841 260 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 IL7P13232 177 aa17.66■□□□□ 0.42
C9orf3-222ENST00000496567 SRD5A1P18405 259 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms