RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 VSTM2BA6NLU5 285 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 NPIPB7O75200 414 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 SERF1AO75920 110 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 NUDT14O95848 222 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 FAHP16930 419 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 DAP3P51398 398 aaKnown RBP7.78□□□□□ -1.16
HPS4-217ENST00000496385 FGF8P55075 233 aaPredicted RBP7.78□□□□□ -1.16
HPS4-217ENST00000496385 LINC00310P59036 64 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 HERV-K104P61576 105 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 RTP5Q14D33 572 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 OR8B8Q15620 311 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 LRRC75BQ2VPJ9 315 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 NMSQ5H8A3 153 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 PEAR1Q5VY43 1037 aaPredicted RBP7.78□□□□□ -1.16
HPS4-217ENST00000496385 C19orf35Q6ZS72 473 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 LINC00346Q8IVM7 164 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 SELENOHQ8IZQ5 122 aaKnown RBP7.78□□□□□ -1.16
HPS4-217ENST00000496385 OR5P3Q8WZ94 311 aa7.78□□□□□ -1.16
HPS4-217ENST00000496385 RERGQ96A58 199 aaPredicted RBP7.78□□□□□ -1.16
HPS4-217ENST00000496385 PHPT1Q9NRX4 125 aaPredicted RBP7.78□□□□□ -1.16
HPS4-217ENST00000496385 UBE2J1Q9Y385 318 aaPredicted RBP7.78□□□□□ -1.16
HPS4-217ENST00000496385 PCDH15Q96QU1 1955 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 CDX4O14627 284 aaPredicted RBP7.77□□□□□ -1.16
HPS4-217ENST00000496385 CHST1O43916 411 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 TMEM50AO95807 157 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 CEACAM5P06731 702 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 PAX9P55771 341 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 IGLV3-21P80748 117 aaPredicted RBP7.77□□□□□ -1.16
HPS4-217ENST00000496385 CXorf66Q5JRM2 361 aaPredicted RBP7.77□□□□□ -1.16
HPS4-217ENST00000496385 TSPO2Q5TGU0 170 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 RNF144BQ7Z419 303 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 PLPPR1Q8TBJ4 325 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 PSMF1Q92530 271 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 C10orf35Q96D05 121 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 ZFYVE21Q9BQ24 234 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 SOHLH2Q9NX45 425 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 ARID1AO14497 2285 aa7.77□□□□□ -1.16
HPS4-217ENST00000496385 IL33O95760 270 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 SERPINA7P05543 415 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 JMJD7P0C870 316 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 PRRX1P54821 245 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 HBG1P69891 147 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 HBG2P69892 147 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 FUT7Q11130 342 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 CLEC12BQ2HXU8 276 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 DEFB133Q30KQ1 61 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 SNAI3Q3KNW1 292 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 ABHD12BQ7Z5M8 362 aaPredicted RBP7.77□□□□□ -1.17
HPS4-217ENST00000496385 NIT1Q86X76 327 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 MUC15Q8N387 334 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 ZIC4Q8N9L1 334 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 LMX1AQ8TE12 382 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 Q96M66 194 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 KLHL13Q9P2N7 655 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 PPIAL4AQ9Y536 164 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 FREM3P0C091 2139 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 ASPMQ8IZT6 3477 aa7.77□□□□□ -1.17
HPS4-217ENST00000496385 PRSS38A1L453 326 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 SLC33A1O00400 549 aaPredicted RBP7.76□□□□□ -1.17
HPS4-217ENST00000496385 WNT2P09544 360 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 SCGB1A1P11684 91 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 ZNF17P17021 662 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 FXYD4P59646 89 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 COX19Q49B96 90 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 OR10J3Q5JRS4 329 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 FIGLAQ6QHK4 219 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 ASCL4Q6XD76 172 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 MEX3BQ6ZN04 569 aaKnown RBP7.76□□□□□ -1.17
HPS4-217ENST00000496385 FAM57BQ71RH2 274 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 C6orf201Q7Z4U5 140 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 BAGE3Q86Y29 109 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 BAGE2Q86Y30 109 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 ASB10Q8WXI3 467 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 PP6455Q8WZ26 134 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 DYRK2Q92630 601 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 BCL2L2Q92843 193 aaPredicted RBP7.76□□□□□ -1.17
HPS4-217ENST00000496385 KCNK17Q96T54 332 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 FBXL7Q9UJT9 491 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 ARID1BQ8NFD5 2236 aaPredicted RBP7.76□□□□□ -1.17
HPS4-217ENST00000496385 IGKV1-9A0A0C4DH69 117 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 CTXND1A0A1B0GTU2 59 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 C9orf172C9J069 976 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 SIRPB1O00241 398 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 ADAM20O43506 726 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 TRAF3IP2O43734 574 aaPredicted RBP7.76□□□□□ -1.17
HPS4-217ENST00000496385 CTSBP07858 339 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 CD33P20138 364 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 PGCP20142 388 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 CAPZBP47756 277 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 HINT1P49773 126 aaPredicted RBP7.76□□□□□ -1.17
HPS4-217ENST00000496385 SMIM21Q3B7S5 101 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 SPIN3Q5JUX0 258 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 RAET1LQ5VY80 246 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 FAM71F2Q6NXP2 309 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 LRP11Q86VZ4 500 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 SLC25A45Q8N413 288 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 C16orf52Q8NHV5 167 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 RSG1Q9BU20 258 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 LRRC61Q9BV99 259 aa7.76□□□□□ -1.17
HPS4-217ENST00000496385 A0A1B0GUS0 222 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms