RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 WIPF1O43516 503 aa16.41■□□□□ 0.22
COL9A2-211ENST00000496215 YPEL1O60688 119 aa16.41■□□□□ 0.22
COL9A2-211ENST00000496215 FGF9P31371 208 aaPredicted RBP16.41■□□□□ 0.22
COL9A2-211ENST00000496215 HLA-DRB3P79483 266 aa16.41■□□□□ 0.22
COL9A2-211ENST00000496215 PLA2G7Q13093 441 aa16.41■□□□□ 0.22
COL9A2-211ENST00000496215 OR2AK2Q8NG84 335 aa16.41■□□□□ 0.22
COL9A2-211ENST00000496215 OR2T10Q8NGZ9 312 aa16.41■□□□□ 0.22
COL9A2-211ENST00000496215 FAM110DQ8TAY7 271 aaPredicted RBP16.41■□□□□ 0.22
COL9A2-211ENST00000496215 YPEL2Q96QA6 119 aa16.41■□□□□ 0.22
COL9A2-211ENST00000496215 TXNL4BQ9NX01 149 aaKnown RBP16.41■□□□□ 0.22
COL9A2-211ENST00000496215 MGAT4AQ9UM21 535 aa16.41■□□□□ 0.22
COL9A2-211ENST00000496215 KCNAB3O43448 404 aa16.4■□□□□ 0.22
COL9A2-211ENST00000496215 LANCL1O43813 399 aa16.4■□□□□ 0.22
COL9A2-211ENST00000496215 CD1BP29016 333 aa16.4■□□□□ 0.22
COL9A2-211ENST00000496215 TMEM50BP56557 158 aa16.4■□□□□ 0.22
COL9A2-211ENST00000496215 EBI3Q14213 229 aa16.4■□□□□ 0.22
COL9A2-211ENST00000496215 NSUN5P1Q3KNT7 163 aa16.4■□□□□ 0.22
COL9A2-211ENST00000496215 LY6G6FQ5SQ64 297 aa16.4■□□□□ 0.22
COL9A2-211ENST00000496215 EAF1Q96JC9 268 aaPredicted RBP16.4■□□□□ 0.22
COL9A2-211ENST00000496215 SSR3Q9UNL2 185 aa16.4■□□□□ 0.22
COL9A2-211ENST00000496215 SMIM30A4D0T7 59 aa16.39■□□□□ 0.21
COL9A2-211ENST00000496215 MOSP00540 346 aa16.39■□□□□ 0.21
COL9A2-211ENST00000496215 RAB6AP20340 208 aa16.39■□□□□ 0.21
COL9A2-211ENST00000496215 GADD45AP24522 165 aa16.39■□□□□ 0.21
COL9A2-211ENST00000496215 MRPS15P82914 257 aaKnown RBP16.39■□□□□ 0.21
COL9A2-211ENST00000496215 NEDD8Q15843 81 aa16.39■□□□□ 0.21
COL9A2-211ENST00000496215 PLAC9Q5JTB6 97 aa16.39■□□□□ 0.21
COL9A2-211ENST00000496215 CENPVQ7Z7K6 275 aaPredicted RBP16.39■□□□□ 0.21
COL9A2-211ENST00000496215 NR2C2APQ86WQ0 139 aa16.39■□□□□ 0.21
COL9A2-211ENST00000496215 NDUFA11Q86Y39 141 aa16.39■□□□□ 0.21
COL9A2-211ENST00000496215 Q8N6K4 173 aa16.39■□□□□ 0.21
COL9A2-211ENST00000496215 OR5AU1Q8NGC0 362 aa16.39■□□□□ 0.21
COL9A2-211ENST00000496215 RAB3CQ96E17 227 aa16.39■□□□□ 0.21
COL9A2-211ENST00000496215 CITED2Q99967 270 aaPredicted RBP16.39■□□□□ 0.21
COL9A2-211ENST00000496215 CMSS1Q9BQ75 279 aaKnown RBP16.39■□□□□ 0.21
COL9A2-211ENST00000496215 LSAMPQ13449 338 aa16.38■□□□□ 0.21
COL9A2-211ENST00000496215 OR4X2Q8NGF9 303 aa16.38■□□□□ 0.21
COL9A2-211ENST00000496215 SAA2-SAA4A0A096LPE2 208 aa16.37■□□□□ 0.21
COL9A2-211ENST00000496215 A0A0B4J203 849 aa16.37■□□□□ 0.21
COL9A2-211ENST00000496215 NCBP2LA6PVI3 153 aaKnown RBP16.37■□□□□ 0.21
COL9A2-211ENST00000496215 NOTOA8MTQ0 251 aa16.37■□□□□ 0.21
COL9A2-211ENST00000496215 SAA2P0DJI9 122 aaPredicted RBP16.37■□□□□ 0.21
COL9A2-211ENST00000496215 MOGAT2Q3SYC2 334 aa16.37■□□□□ 0.21
COL9A2-211ENST00000496215 TPRA1Q86W33 373 aa16.37■□□□□ 0.21
COL9A2-211ENST00000496215 ODF3L1Q8IXM7 274 aa16.37■□□□□ 0.21
COL9A2-211ENST00000496215 OR10R2Q8NGX6 335 aa16.37■□□□□ 0.21
COL9A2-211ENST00000496215 OR51E2Q9H255 320 aa16.37■□□□□ 0.21
COL9A2-211ENST00000496215 IFI27L2Q9H2X8 130 aa16.37■□□□□ 0.21
COL9A2-211ENST00000496215 Q9N2K0 584 aa16.37■□□□□ 0.21
COL9A2-211ENST00000496215 SLC23A1Q9UHI7 598 aa16.37■□□□□ 0.21
COL9A2-211ENST00000496215 PRKDCP78527 4128 aaKnown RBP16.37■□□□□ 0.21
COL9A2-211ENST00000496215 METTL21EPA6NDL7 271 aa16.36■□□□□ 0.21
COL9A2-211ENST00000496215 ZNF736B4DX44 427 aaPredicted RBP16.36■□□□□ 0.21
COL9A2-211ENST00000496215 ST8SIA5O15466 376 aa16.36■□□□□ 0.21
COL9A2-211ENST00000496215 HSPA12AO43301 675 aa16.36■□□□□ 0.21
COL9A2-211ENST00000496215 CD3GP09693 182 aa16.36■□□□□ 0.21
COL9A2-211ENST00000496215 SLC2A2P11168 524 aaPredicted RBP16.36■□□□□ 0.21
COL9A2-211ENST00000496215 ZNF833PQ6ZTB9 187 aa16.36■□□□□ 0.21
COL9A2-211ENST00000496215 OR8H1Q8NGG4 311 aa16.36■□□□□ 0.21
COL9A2-211ENST00000496215 PTX4Q96A99 478 aa16.36■□□□□ 0.21
COL9A2-211ENST00000496215 KCTD7Q96MP8 289 aa16.36■□□□□ 0.21
COL9A2-211ENST00000496215 CHCHD6Q9BRQ6 235 aa16.36■□□□□ 0.21
COL9A2-211ENST00000496215 MRPL20Q9BYC9 149 aaKnown RBP16.36■□□□□ 0.21
COL9A2-211ENST00000496215 LIN7CQ9NUP9 197 aaKnown RBP16.36■□□□□ 0.21
COL9A2-211ENST00000496215 LOC100506127A0A0U1RQW1 187 aa16.35■□□□□ 0.21
COL9A2-211ENST00000496215 SERPINE3A8MV23 424 aa16.35■□□□□ 0.21
COL9A2-211ENST00000496215 MFNGO00587 321 aa16.35■□□□□ 0.21
COL9A2-211ENST00000496215 OPN1MWP04001 364 aa16.35■□□□□ 0.21
COL9A2-211ENST00000496215 OPN1MW2P0DN77 364 aa16.35■□□□□ 0.21
COL9A2-211ENST00000496215 OPN1MW3P0DN78 364 aa16.35■□□□□ 0.21
COL9A2-211ENST00000496215 HIST1H1DP16402 221 aaKnown RBP16.35■□□□□ 0.21
COL9A2-211ENST00000496215 ZBTB25P24278 435 aa16.35■□□□□ 0.21
COL9A2-211ENST00000496215 OR3A3P47888 321 aa16.35■□□□□ 0.21
COL9A2-211ENST00000496215 FAM71F2Q6NXP2 309 aa16.35■□□□□ 0.21
COL9A2-211ENST00000496215 SLC35E3Q7Z769 313 aa16.35■□□□□ 0.21
COL9A2-211ENST00000496215 EDARADDQ8WWZ3 215 aa16.35■□□□□ 0.21
COL9A2-211ENST00000496215 OR1A1Q9P1Q5 309 aa16.35■□□□□ 0.21
COL9A2-211ENST00000496215 A0A075B6Q4 140 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 A0A1W2PRX2 142 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 PSMB11A5LHX3 300 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 ADARB2-AS1A8MUL3 147 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 TNFAIP8O95379 198 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 FCGR3AP08637 254 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 SCTP09683 121 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 CD36P16671 472 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 SFXN4Q6P4A7 337 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 FOXRED2Q8IWF2 684 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 Q8N9W7 124 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 OR4F17Q8NGA8 305 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 R3HDM4Q96D70 268 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 OR4F4Q96R69 305 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 NABP2Q9BQ15 211 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 PARP12Q9H0J9 701 aaKnown RBP16.34■□□□□ 0.21
COL9A2-211ENST00000496215 ATG5Q9H1Y0 275 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 VCX3AQ9NNX9 186 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 PIPOXQ9P0Z9 390 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 DAPK2Q9UIK4 370 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 KCNK7Q9Y2U2 307 aa16.34■□□□□ 0.21
COL9A2-211ENST00000496215 TRDCB7Z8K6 153 aa16.33■□□□□ 0.2
COL9A2-211ENST00000496215 RAB27BO00194 218 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms