RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, human

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-221	ENST00000495755	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	JPT1	Q9UK76	154 aa		5.68	□□□□□ -1.5
VPS52-221	ENST00000495755	TRBV6-6	A0A0A6YYG2	114 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	AP4M1	O00189	453 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	SLC17A2	O00624	439 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	SOCS1	O15524	211 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	ARL6IP5	O75915	188 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	DUS4L	O95620	317 aa	Known RBP	5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	PF4	P02776	101 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	IGF1	P05019	195 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	HSMCR30	P0CW71	290 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	PSMA1	P25786	263 aa	Known RBP	5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	BLVRB	P30043	206 aa	Predicted RBP	5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	SLC6A1	P30531	599 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	MAP2K4	P45985	399 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	THBS3	P49746	956 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	FABP5	Q01469	135 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	CFHR3	Q02985	330 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	P2RY14	Q15391	338 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	PNLIPRP3	Q17RR3	467 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	KHDC1L	Q5JSQ8	128 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	ZNF833P	Q6ZTB9	187 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	C18orf65	Q6ZTR6	163 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	MRPL41	Q8IXM3	137 aa	Known RBP	5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	SVOP	Q8N4V2	548 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	RNF152	Q8N8N0	203 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	GALM	Q96C23	342 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	RCC1L	Q96I51	464 aa	Known RBP	5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	RITA1	Q96K30	269 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	MGLL	Q99685	303 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	RASL11B	Q9BPW5	248 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	NABP2	Q9BQ15	211 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	HSPB9	Q9BQS6	159 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	ZNF251	Q9BRH9	671 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	ABHD14A	Q9BUJ0	271 aa		5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	RIMS4	Q9H426	269 aa	Predicted RBP	5.67	□□□□□ -1.5
VPS52-221	ENST00000495755	LDLRAD4	O15165	306 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	RGS11	O94810	467 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	RPLP1	P05386	114 aa	Known RBP	5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	ARSB	P15848	533 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	CALR	P27797	417 aa	Known RBP	5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	SOX6	P35712	828 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	MYCNOS	P40205	109 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	OR3A3	P47888	321 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	HSPA13	P48723	471 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	TMEM50B	P56557	158 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	KRTAP10-11	P60412	298 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	EGFEM1P	Q0D2K5	195 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	FOXE3	Q13461	319 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	RAB11B	Q15907	218 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	C2orf76	Q3KRA6	126 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	TEX38	Q6PEX7	206 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	IZUMO2	Q6UXV1	221 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	C8orf86	Q6ZUL3	223 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	ZNF695	Q8IW36	515 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	OR2AK2	Q8NG84	335 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	OR51D1	Q8NGF3	324 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	MRAP	Q8TCY5	172 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	P2RX4	Q99571	388 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	URM1	Q9BTM9	101 aa	Known RBP	5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	GON7	Q9BXV9	100 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	MRPL20	Q9BYC9	149 aa	Known RBP	5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	CCDC90B	Q9GZT6	254 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	IFI27L2	Q9H2X8	130 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	VCX3B	Q9H321	246 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	PLGRKT	Q9HBL7	147 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	ACOT13	Q9NPJ3	140 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	PLEKHJ1	Q9NW61	149 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	ABRACL	Q9P1F3	81 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	AK3	Q9UIJ7	227 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	ZNF580	Q9UK33	172 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	HSF4	Q9ULV5	492 aa		5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	AK6	Q9Y3D8	172 aa	Known RBP	5.66	□□□□□ -1.5
VPS52-221	ENST00000495755	SAA2-SAA4	A0A096LPE2	208 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	ITGB1BP1	O14713	200 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	IGHG4	P01861	327 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	ELANE	P08246	267 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	SAA2	P0DJI9	122 aa	Predicted RBP	5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	CT45A6	P0DMU7	189 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	CT45A5	P0DMU8	189 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	CT45A7	P0DMV0	189 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	CNTFR	P26992	372 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	CDX1	P47902	265 aa	Predicted RBP	5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	PSMD7	P51665	324 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	CLDN12	P56749	244 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	ACTB	P60709	375 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	PLA2G7	Q13093	441 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	KIR2DS1	Q14954	304 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	MMD	Q15546	238 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	TBCE	Q15813	527 aa	Predicted RBP	5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	SSX1	Q16384	188 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	PLAC9	Q5JTB6	97 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	FAM71F2	Q6NXP2	309 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	CD200R1L	Q6Q8B3	271 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	LCNL1	Q6ZST4	164 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	MOB1B	Q7L9L4	216 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	ZNF367	Q7RTV3	350 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	KLHL30-AS1	Q8NEE0	82 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	NPB	Q8NG41	125 aa		5.65	□□□□□ -1.5
VPS52-221	ENST00000495755	SETD6	Q8TBK2	473 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms