RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 QRFPP83859 136 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 FOXE3Q13461 319 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 FHL3Q13643 280 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 IRF3Q14653 427 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 MMDQ15546 238 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 PNLIPRP3Q17RR3 467 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 RBM48Q5RL73 367 aaKnown RBP9.09□□□□□ -0.95
VTI1A-208ENST00000494728 C1orf100Q5SVJ3 147 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 ASPHD1Q5U4P2 390 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 TRAT1Q6PIZ9 186 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 ZNF833PQ6ZTB9 187 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 MYOZ3Q8TDC0 251 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 NRG4Q8WWG1 115 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 KCTD7Q96MP8 289 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 RASL11BQ9BPW5 248 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 HDHD3Q9BSH5 251 aaPredicted RBP9.09□□□□□ -0.95
VTI1A-208ENST00000494728 FAAP24Q9BTP7 215 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 KLK15Q9H2R5 256 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 GNB4Q9HAV0 340 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 JPT1Q9UK76 154 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 FBXO7Q9Y3I1 522 aa9.09□□□□□ -0.95
VTI1A-208ENST00000494728 SLC22A1O15245 554 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 ATP6V0E1O15342 81 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 ST8SIA5O15466 376 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 NAPSAO96009 420 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 IGF1P05019 195 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 GLAP06280 429 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 MAPK3P27361 379 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-208ENST00000494728 PPIFP30405 207 aaKnown RBP9.08□□□□□ -0.96
VTI1A-208ENST00000494728 SLC6A1P30531 599 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 AQP4P55087 323 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 ACTBP60709 375 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 KIAA0141Q14154 515 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-208ENST00000494728 DEFB121Q5J5C9 76 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 CXorf66Q5JRM2 361 aaPredicted RBP9.08□□□□□ -0.96
VTI1A-208ENST00000494728 ZNF880Q6PDB4 577 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 KCTD12Q96CX2 325 aaKnown RBP9.08□□□□□ -0.96
VTI1A-208ENST00000494728 ZNF251Q9BRH9 671 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 MND1Q9BWT6 205 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 TM2D1Q9BX74 207 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 TMEM59Q9BXS4 323 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 CST11Q9H112 138 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 ERGIC3Q9Y282 383 aa9.08□□□□□ -0.96
VTI1A-208ENST00000494728 IGHV7-81A0A0B4J1V7 117 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 FOXI3A8MTJ6 420 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-208ENST00000494728 TMEM14DPA8MWL7 114 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 PTGES3LE9PB15 166 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 RRP9O43818 475 aaKnown RBP9.07□□□□□ -0.96
VTI1A-208ENST00000494728 YPEL1O60688 119 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 HLA-DRB1P01911 266 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 ELANEP08246 267 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 UCHL1P09936 223 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 CD37P11049 281 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 VDAC1P21796 283 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 BLVRBP30043 206 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-208ENST00000494728 CDX1P47902 265 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-208ENST00000494728 RPS25P62851 125 aaKnown RBP9.07□□□□□ -0.96
VTI1A-208ENST00000494728 HTD2P86397 168 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 HSD17B12Q53GQ0 312 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 RPL39P5Q59GN2 51 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 VAX1Q5SQQ9 334 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 LIPKQ5VXJ0 399 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 RNLSQ5VYX0 342 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 STEAP3Q658P3 488 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 FAM131AQ6UXB0 335 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 GLDNQ6ZMI3 551 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-208ENST00000494728 TMEM91Q6ZNR0 172 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 ZNF554Q86TJ5 538 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 OR8H1Q8NGG4 311 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 OR8U1Q8NH10 309 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 CASTOR1Q8WTX7 329 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 IL1F10Q8WWZ1 152 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 PHYHIPQ92561 330 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 TMEM203Q969S6 136 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 YPEL2Q96QA6 119 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 PRR25Q96S07 402 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 ANKRD60Q9BZ19 345 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 LPAR5Q9H1C0 372 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 PARP11Q9NR21 331 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 OR1A1Q9P1Q5 309 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 GHRLQ9UBU3 117 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 ZNF580Q9UK33 172 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 WSB1Q9Y6I7 421 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 TNCP24821 2201 aa9.07□□□□□ -0.96
VTI1A-208ENST00000494728 SOCS1O15524 211 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 SOX15O60248 233 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 UBBP0CG47 229 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 SRMP19623 302 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 GNB1P62873 340 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 PLA2G7Q13093 441 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 KIR2DS1Q14954 304 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 P2RY14Q15391 338 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 SPHARQ15513 63 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 MED22Q15528 200 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 C5orf64Q2M2E5 130 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 C19orf54Q5BKX5 351 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 CEACAM19Q7Z692 300 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 OR2AK2Q8NG84 335 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 C4orf3Q8WVX3 66 aa9.06□□□□□ -0.96
VTI1A-208ENST00000494728 DPF1Q92782 380 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms