RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 AK6Q9Y3D8 172 aaKnown RBP7.55□□□□□ -1.2
MSH5-218ENST00000494646 K7EIL1 84 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 AP4M1O00189 453 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 SOCS1O15524 211 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 UBBP0CG47 229 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 MYF6P23409 242 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 CNTFRP26992 372 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 CHATP28329 748 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 BLVRBP30043 206 aaPredicted RBP7.54□□□□□ -1.2
MSH5-218ENST00000494646 MYCNOSP40205 109 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 MAP2K4P45985 399 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 OR3A3P47888 321 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 RAB25P57735 213 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 RPS27AP62979 156 aaKnown RBP7.54□□□□□ -1.2
MSH5-218ENST00000494646 UNC119Q13432 240 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 IRF3Q14653 427 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 P2RY14Q15391 338 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 Q3ZCU0 254 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 TEX38Q6PEX7 206 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 TMEM91Q6ZNR0 172 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 ODF3L1Q8IXM7 274 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 OR51D1Q8NGF3 324 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 KCNG3Q8TAE7 436 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 IL1F10Q8WWZ1 152 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 UFD1Q92890 307 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 RCC1LQ96I51 464 aaKnown RBP7.54□□□□□ -1.2
MSH5-218ENST00000494646 ABHD14AQ9BUJ0 271 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 TMEM59Q9BXS4 323 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 CHMP1AQ9HD42 196 aaPredicted RBP7.54□□□□□ -1.2
MSH5-218ENST00000494646 PLEKHJ1Q9NW61 149 aa7.54□□□□□ -1.2
MSH5-218ENST00000494646 A0A0A6YYD4 124 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 TMEM14DPA8MWL7 114 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 TXNL1O43396 289 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 RGS10O43665 173 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 LANCL1O43813 399 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 YPEL1O60688 119 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 UCHL1P09936 223 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 SOX6P35712 828 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 ZNF137PP52743 207 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 CLDN12P56749 244 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 RPS25P62851 125 aaKnown RBP7.53□□□□□ -1.2
MSH5-218ENST00000494646 QRFPP83859 136 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 HTD2P86397 168 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 LSAMPQ13449 338 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 DEFB136Q30KP8 78 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 TMEM30BQ3MIR4 351 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 STEAP3Q658P3 488 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 ZNF695Q8IW36 515 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 FAM71E2Q8N5Q1 922 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 COMMD1Q8N668 190 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 PHYHIPQ92561 330 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 GALMQ96C23 342 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 KCTD12Q96CX2 325 aaKnown RBP7.53□□□□□ -1.2
MSH5-218ENST00000494646 RAX2Q96IS3 184 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 YPEL2Q96QA6 119 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 GFI1Q99684 422 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 NABP2Q9BQ15 211 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 MRPL20Q9BYC9 149 aaKnown RBP7.53□□□□□ -1.2
MSH5-218ENST00000494646 LPAR5Q9H1C0 372 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 DUSP21Q9H596 190 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 PLGRKTQ9HBL7 147 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 JPT1Q9UK76 154 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 LRRC42Q9Y546 428 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 WSB1Q9Y6I7 421 aa7.53□□□□□ -1.2
MSH5-218ENST00000494646 CCL24O00175 119 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 SLC22A1O15245 554 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 ST8SIA5O15466 376 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 RGS11O94810 467 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 DUS4LO95620 317 aaKnown RBP7.52□□□□□ -1.21
MSH5-218ENST00000494646 CD37P11049 281 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 ARSBP15848 533 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 VDAC1P21796 283 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 VEGFCP49767 419 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 TMEM50BP56557 158 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 ACTBP60709 375 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 TPBGQ13641 420 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 MMDQ15546 238 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 HMGN3Q15651 99 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 C2orf76Q3KRA6 126 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 CXorf66Q5JRM2 361 aaPredicted RBP7.52□□□□□ -1.21
MSH5-218ENST00000494646 OR2AK2Q8NG84 335 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 OR8H1Q8NGG4 311 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 OR6M1Q8NGM8 313 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 ABHD14BQ96IU4 210 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 KCTD7Q96MP8 289 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 P2RX4Q99571 388 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 ZNF251Q9BRH9 671 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 HDHD3Q9BSH5 251 aaPredicted RBP7.52□□□□□ -1.21
MSH5-218ENST00000494646 TM2D1Q9BX74 207 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 GON7Q9BXV9 100 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 ANKRD60Q9BZ19 345 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 PARP12Q9H0J9 701 aaKnown RBP7.52□□□□□ -1.21
MSH5-218ENST00000494646 ABRACLQ9P1F3 81 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 ZNF107Q9UII5 783 aaPredicted RBP7.52□□□□□ -1.21
MSH5-218ENST00000494646 AK3Q9UIJ7 227 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 RNF150Q9ULK6 438 aa7.52□□□□□ -1.21
MSH5-218ENST00000494646 KMT2CQ8NEZ4 4911 aaKnown RBP7.51□□□□□ -1.21
MSH5-218ENST00000494646 SAA2-SAA4A0A096LPE2 208 aa7.51□□□□□ -1.21
MSH5-218ENST00000494646 G3V318 75 aa7.51□□□□□ -1.21
MSH5-218ENST00000494646 RRP9O43818 475 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms