RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 SLC25A6P12236 298 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 OR2B11Q5JQS5 317 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 SOHLH1Q5JUK2 328 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 ZNF808Q8N4W9 903 aaPredicted RBP9.44□□□□□ -0.9
CHMP3-209ENST00000494623 LSM10Q969L4 123 aaKnown RBP9.44□□□□□ -0.9
CHMP3-209ENST00000494623 ASCL3Q9NQ33 180 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 TTC28Q96AY4 2481 aa9.44□□□□□ -0.9
CHMP3-209ENST00000494623 CFAP47Q6ZTR5 3102 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 TRAV17A0A0B4J275 112 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 PIGBOS1A0A0B4J2F0 54 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 TMEM30CPA0ZSE6 113 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 AQP7O14520 342 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 DFFBO76075 338 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 IGKV3-15P01624 115 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 IL2RGP31785 369 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 TAS2R30P59541 319 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 GUSBP1Q15486 140 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 KRBOX4Q5JUW0 171 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 FGFRL1Q8N441 504 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 TPRX1Q8N7U7 411 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 C15orf54Q8N8G6 183 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 ZNF610Q8N9Z0 462 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 GALMQ96C23 342 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 CXXC4Q9H2H0 198 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 LIN7CQ9NUP9 197 aaKnown RBP9.43□□□□□ -0.9
CHMP3-209ENST00000494623 C12orf77C9JDV5 145 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 ARG1P05089 322 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 FBP1P09467 338 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 CECR9P0C854 216 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 ARL16Q0P5N6 197 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 SCGB1C1Q8TD33 95 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 SARAFQ96BY9 339 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 OPN3Q9H1Y3 402 aaPredicted RBP9.43□□□□□ -0.9
CHMP3-209ENST00000494623 BIN3Q9NQY0 253 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 WSB1Q9Y6I7 421 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 CACNA1DQ01668 2161 aa9.43□□□□□ -0.9
CHMP3-209ENST00000494623 HOXB1P14653 301 aaPredicted RBP9.42□□□□□ -0.9
CHMP3-209ENST00000494623 GABRA2P47869 451 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 SPANXN5Q5MJ07 72 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 Q6ZR03 302 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 LINC00518Q8N0U6 118 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 SNIP1Q8TAD8 396 aaKnown RBP9.42□□□□□ -0.9
CHMP3-209ENST00000494623 MRGPRDQ8TDS7 321 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 HIST1H2BAQ96A08 127 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 RSG1Q9BU20 258 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 OR2D2Q9H210 308 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 HES4Q9HCC6 221 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 METRNQ9UJH8 293 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 SPENQ96T58 3664 aaKnown RBP9.42□□□□□ -0.9
CHMP3-209ENST00000494623 A0A1B0GW64 132 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 PRR33A8MZF0 331 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 RAMP3O60896 148 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 HBZP02008 142 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 CEACAM1P13688 526 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 TLE4Q04727 773 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 IGFL2Q6UWQ7 119 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 ACP7Q6ZNF0 438 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 ZNF600Q6ZNG1 722 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 SPOCK3Q9BQ16 436 aa9.42□□□□□ -0.9
CHMP3-209ENST00000494623 A0A1W2PPH5 198 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 PTBP3O95758 552 aaKnown RBP9.41□□□□□ -0.9
CHMP3-209ENST00000494623 KRASP01116 189 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 WNT2P09544 360 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 BTF3P20290 206 aaKnown RBP9.41□□□□□ -0.9
CHMP3-209ENST00000494623 GCH1P30793 250 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 ZNF816Q0VGE8 651 aaPredicted RBP9.41□□□□□ -0.9
CHMP3-209ENST00000494623 WDR82Q6UXN9 313 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 RFESDQ8TAC1 157 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 SVILO95425 2214 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 DIDO1Q9BTC0 2240 aaKnown RBP9.41□□□□□ -0.9
CHMP3-209ENST00000494623 A0A1W2PPE2 198 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 OOEPA6NGQ2 149 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 COX5AP20674 150 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 G6PCP35575 357 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 CD200P41217 278 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 GLIPR1P48060 266 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 RPL30P62888 115 aaKnown RBP9.41□□□□□ -0.9
CHMP3-209ENST00000494623 ZNF718Q3SXZ3 478 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 SLC35E4Q6ICL7 350 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 FAM180AQ6UWF9 173 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 BTNL3Q6UXE8 466 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 FAM24BQ8N5W8 94 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 ZNF645Q8N7E2 425 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 COQ2Q96H96 371 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 PLSCR4Q9NRQ2 329 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 KIAA1456Q9P272 454 aa9.41□□□□□ -0.9
CHMP3-209ENST00000494623 IGHV3-43A0A0B4J1X8 118 aa9.4□□□□□ -0.9
CHMP3-209ENST00000494623 BTBD17A6NE02 478 aa9.4□□□□□ -0.9
CHMP3-209ENST00000494623 RNF212BA8MTL3 300 aa9.4□□□□□ -0.9
CHMP3-209ENST00000494623 GALR2O43603 387 aaPredicted RBP9.4□□□□□ -0.9
CHMP3-209ENST00000494623 ACAA1P09110 424 aaPredicted RBP9.4□□□□□ -0.9
CHMP3-209ENST00000494623 IGHV3-43DP0DP04 118 aa9.4□□□□□ -0.9
CHMP3-209ENST00000494623 RAB2AP61019 212 aa9.4□□□□□ -0.9
CHMP3-209ENST00000494623 COL10A1Q03692 680 aa9.4□□□□□ -0.9
CHMP3-209ENST00000494623 HABP2Q14520 560 aaPredicted RBP9.4□□□□□ -0.9
CHMP3-209ENST00000494623 ACSF3Q4G176 576 aaPredicted RBP9.4□□□□□ -0.9
CHMP3-209ENST00000494623 HAPLN4Q86UW8 402 aa9.4□□□□□ -0.9
CHMP3-209ENST00000494623 NINJ1Q92982 152 aa9.4□□□□□ -0.9
CHMP3-209ENST00000494623 TAAR6Q96RI8 345 aa9.4□□□□□ -0.9
CHMP3-209ENST00000494623 VSIRQ9H7M9 311 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms