RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 H0YIZ8 118 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 SPINT2O43291 252 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 PITX3O75364 302 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 ADAP1O75689 374 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 MPC2O95563 127 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 GYPAP02724 150 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 SOD3P08294 240 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 P0C879 139 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DUX4L2P0CJ85 424 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DUX4L3P0CJ86 424 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DUX4L4P0CJ87 422 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DUX4L5P0CJ88 424 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DUX4L6P0CJ89 424 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DUX4L7P0CJ90 424 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 SELLP14151 372 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 CXCL2P19875 107 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 PSMB6P28072 239 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 IL2RGP31785 369 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 SSTR5P35346 364 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DLX6P56179 175 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 FXYD4P59646 89 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 SNRPD2P62316 118 aaKnown RBP5.61□□□□□ -1.51
MSH5-217ENST00000494458 ABCA4P78363 2273 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 SRPXP78539 464 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 ZNF345Q14585 488 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 SLC9A3R2Q15599 337 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 ABCA11PQ4W5N1 156 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 TMEM155Q4W5P6 130 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 ZNF585BQ52M93 769 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 NMSQ5H8A3 153 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DOPEY1Q5JWR5 2465 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 GGNBP1Q5YKI7 109 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 C11orf87Q6NUJ2 197 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DUX4L9Q6RFH8 374 aaPredicted RBP5.61□□□□□ -1.51
MSH5-217ENST00000494458 GSG1LQ6UXU4 331 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 TBC1D26Q86UD7 250 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 CMTM1Q8IZ96 169 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 SELENOHQ8IZQ5 122 aaKnown RBP5.61□□□□□ -1.51
MSH5-217ENST00000494458 C11orf42Q8N5U0 333 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DRAM1Q8N682 238 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 ZNF645Q8N7E2 425 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 FAM216BQ8N7L0 139 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 OR52L2PQ8NGH6 319 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 C8orf46Q8TAG6 207 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 CASTOR1Q8WTX7 329 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 PPP1R1CQ8WVI7 109 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 LSM10Q969L4 123 aaKnown RBP5.61□□□□□ -1.51
MSH5-217ENST00000494458 TOMM40LQ969M1 308 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 ARL11Q969Q4 196 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DACT3Q96B18 629 aaPredicted RBP5.61□□□□□ -1.51
MSH5-217ENST00000494458 C5orf30Q96GV9 206 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 ABHD14BQ96IU4 210 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 CCL13Q99616 98 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 TMEM246Q9BRR3 403 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DCTN5Q9BTE1 182 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 C11orf1Q9H5F2 150 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 SLA2Q9H6Q3 261 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 RAB9BQ9NP90 201 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DYNLRB1Q9NP97 96 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 GFOD1Q9NXC2 390 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 DUX4Q9UBX2 424 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 LPAR3Q9UBY5 353 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 TNFSF18Q9UNG2 199 aa5.61□□□□□ -1.51
MSH5-217ENST00000494458 hADV38S2A0JD32 116 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 RNF222A6NCQ9 220 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 CCSO14618 274 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 IGKV1-39P01597 117 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 IGKV1D-39P04432 117 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 VDAC1P21796 283 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 ZNF134P52741 427 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 TMEM33P57088 247 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 ID3Q02535 119 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 SRSF1Q07955 248 aaKnown RBP eCLIP5.6□□□□□ -1.512e-10■■■■□ 24.5
MSH5-217ENST00000494458 GNMTQ14749 295 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 HFEQ30201 348 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 SP6Q3SY56 376 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 AARDQ4LEZ3 155 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 PHLDA2Q53GA4 152 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 PRSS54Q6PEW0 395 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 LYPD2Q6UXB3 125 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 HEPN1Q6WQI6 88 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 ZNF66Q6ZN08 573 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 LYZL2Q7Z4W2 148 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 ODF3L1Q8IXM7 274 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 TPRX1Q8N7U7 411 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.6□□□□□ -1.51
MSH5-217ENST00000494458 LY6G5BQ8NDX9 201 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 OR4D5Q8NGN0 318 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 SECTM1Q8WVN6 248 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 IL1F10Q8WWZ1 152 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 EDARADDQ8WWZ3 215 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 CCL17Q92583 94 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 SEC22AQ96IW7 307 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 ZNF251Q9BRH9 671 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 KRTAP9-2Q9BYQ4 174 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 CHIAQ9BZP6 476 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 RAB1BQ9H0U4 201 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 PLEKHF2Q9H8W4 249 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 OR2S2Q9NQN1 319 aa5.6□□□□□ -1.51
MSH5-217ENST00000494458 CALYQ9NYX4 217 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms