RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 AUNIPQ9H7T9 357 aa10.07□□□□□ -0.8
TRA2A-209ENST00000494255 CCDC59Q9P031 241 aaKnown RBP10.07□□□□□ -0.8
TRA2A-209ENST00000494255 FAM25AB3EWG3 89 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 FAM25CB3EWG5 89 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 FAM25GB3EWG6 89 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 SLC31A2O15432 143 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 GPR137BO60478 399 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 HPGDSO60760 199 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 DYNLT3P51808 116 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 LY6EQ16553 131 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 CT45A1Q5HYN5 189 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 LY6G6FQ5SQ64 297 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 CT45A3Q8NHU0 189 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 PITPNC1Q9UKF7 332 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 FAM181BA6NEQ2 426 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 HSD17B6O14756 317 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 BET1O15155 118 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 DIRAS3O95661 229 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 GAPDHP04406 335 aaKnown RBP10.06□□□□□ -0.8
TRA2A-209ENST00000494255 CEACAM6P40199 344 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 CBX5P45973 191 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 RAB13P51153 203 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 RPL15P61313 204 aaKnown RBP10.06□□□□□ -0.8
TRA2A-209ENST00000494255 LIAT1Q6ZQX7 453 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 Q6ZS49 121 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 OR8H3Q8N146 312 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 LYG1Q8N1E2 194 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 DTX3Q8N9I9 347 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 DYNC2LI1Q8TCX1 351 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 EDARADDQ8WWZ3 215 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 GCDHQ92947 438 aaPredicted RBP10.06□□□□□ -0.8
TRA2A-209ENST00000494255 RAB18Q9NP72 206 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 OR1A1Q9P1Q5 309 aa10.06□□□□□ -0.8
TRA2A-209ENST00000494255 RGS5O15539 181 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 SSX5O60225 188 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 GSTT2P0CG29 244 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 GSTT2BP0CG30 244 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 ELK1P19419 428 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 ZNF134P52741 427 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 TAS2R20P59543 309 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 ZNF816Q0VGE8 651 aaPredicted RBP10.05□□□□□ -0.8
TRA2A-209ENST00000494255 DHRS7BQ6IAN0 325 aaPredicted RBP10.05□□□□□ -0.8
TRA2A-209ENST00000494255 OR10J5Q8NHC4 309 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 PIFOQ8TCI5 191 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 MDFIQ99750 246 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 GINS4Q9BRT9 223 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 CABLES2Q9BTV7 478 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 RSL24D1Q9UHA3 163 aaKnown RBP10.05□□□□□ -0.8
TRA2A-209ENST00000494255 ADAM30Q9UKF2 790 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 TCF19Q9Y242 345 aa10.05□□□□□ -0.8
TRA2A-209ENST00000494255 IGKV1-6A0A0C4DH72 117 aa10.04□□□□□ -0.8
TRA2A-209ENST00000494255 ITGB1BP1O14713 200 aa10.04□□□□□ -0.8
TRA2A-209ENST00000494255 TIMM23O14925 209 aa10.04□□□□□ -0.8
TRA2A-209ENST00000494255 TXNL1O43396 289 aa10.04□□□□□ -0.8
TRA2A-209ENST00000494255 CTXN2P0C2S0 81 aa10.04□□□□□ -0.8
TRA2A-209ENST00000494255 REG1BP48304 166 aa10.04□□□□□ -0.8
TRA2A-209ENST00000494255 HERPUD1Q15011 391 aa10.04□□□□□ -0.8
TRA2A-209ENST00000494255 IGSF11Q5DX21 431 aa10.04□□□□□ -0.8
TRA2A-209ENST00000494255 MOB3BQ86TA1 216 aa10.04□□□□□ -0.8
TRA2A-209ENST00000494255 IFT46Q9NQC8 304 aa10.04□□□□□ -0.8
TRA2A-209ENST00000494255 MRPS7Q9Y2R9 242 aaKnown RBP10.04□□□□□ -0.8
TRA2A-209ENST00000494255 IGHV1-3A0A0C4DH29 117 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 A0A1W2PPI3 338 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 ZNF701M0R085 212 aaPredicted RBP10.03□□□□□ -0.8
TRA2A-209ENST00000494255 ST8SIA5O15466 376 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 LANCL1O43813 399 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 HKR1P10072 659 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 PTHLHP12272 177 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 PRSS3P35030 304 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 ZNF137PP52743 207 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 DIAPH2-AS1Q14236 149 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 TGIF2LXQ8IUE1 241 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 DRAM1Q8N682 238 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 BEST4Q8NFU0 473 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 OR56B4Q8NH76 319 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 CAPSLQ8WWF8 208 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 RTN4IP1Q8WWV3 396 aaPredicted RBP10.03□□□□□ -0.8
TRA2A-209ENST00000494255 ST6GALNAC6Q969X2 333 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 RBM38Q9H0Z9 239 aaKnown RBP10.03□□□□□ -0.8
TRA2A-209ENST00000494255 RDH8Q9NYR8 311 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 PIPOXQ9P0Z9 390 aa10.03□□□□□ -0.8
TRA2A-209ENST00000494255 IGKV1D-8A0A087WSZ0 117 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 TRBV6-7A0A0A0MS04 114 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 A6NDX4 124 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 RAB29O14966 203 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 FAM106CPP0CH98 169 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 ARPC4P59998 168 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 CNIH2Q6PI25 160 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 HOGA1Q86XE5 327 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 TMEM219Q86XT9 240 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 S1PR3Q99500 378 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 PARP12Q9H0J9 701 aaKnown RBP10.02□□□□□ -0.8
TRA2A-209ENST00000494255 C11orf54Q9H0W9 315 aaPredicted RBP10.02□□□□□ -0.8
TRA2A-209ENST00000494255 GHITMQ9H3K2 345 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 NDUFA13Q9P0J0 144 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 ANXA10Q9UJ72 324 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 ZNF221Q9UK13 617 aa10.02□□□□□ -0.8
TRA2A-209ENST00000494255 RBM7Q9Y580 266 aaKnown RBP10.02□□□□□ -0.8
TRA2A-209ENST00000494255 CUBNO60494 3623 aa10.02□□□□□ -0.81
TRA2A-209ENST00000494255 SAA2-SAA4A0A096LPE2 208 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms