RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 LINC00527Q9UJ94 153 aa11.68□□□□□ -0.54
ATG4B-224ENST00000494132 STUB1Q9UNE7 303 aa11.68□□□□□ -0.54
ATG4B-224ENST00000494132 NCBP2LA6PVI3 153 aaKnown RBP11.67□□□□□ -0.54
ATG4B-224ENST00000494132 ST8SIA5O15466 376 aa11.67□□□□□ -0.54
ATG4B-224ENST00000494132 OR3A3P47888 321 aa11.67□□□□□ -0.54
ATG4B-224ENST00000494132 HTD2P86397 168 aa11.67□□□□□ -0.54
ATG4B-224ENST00000494132 TMEM30BQ3MIR4 351 aa11.67□□□□□ -0.54
ATG4B-224ENST00000494132 CENPVQ7Z7K6 275 aaPredicted RBP11.67□□□□□ -0.54
ATG4B-224ENST00000494132 ODF3L1Q8IXM7 274 aa11.67□□□□□ -0.54
ATG4B-224ENST00000494132 IZUMO1Q8IYV9 350 aa11.67□□□□□ -0.54
ATG4B-224ENST00000494132 OR56B1Q8NGI3 324 aa11.67□□□□□ -0.54
ATG4B-224ENST00000494132 CMSS1Q9BQ75 279 aaKnown RBP11.67□□□□□ -0.54
ATG4B-224ENST00000494132 CHCHD6Q9BRQ6 235 aa11.67□□□□□ -0.54
ATG4B-224ENST00000494132 OR1A1Q9P1Q5 309 aa11.67□□□□□ -0.54
ATG4B-224ENST00000494132 RAB22AQ9UL26 194 aa11.67□□□□□ -0.54
ATG4B-224ENST00000494132 HSF4Q9ULV5 492 aa11.67□□□□□ -0.54
ATG4B-224ENST00000494132 VWFP04275 2813 aa11.67□□□□□ -0.54
ATG4B-224ENST00000494132 LOC100506127A0A0U1RQW1 187 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 M0QZK8 103 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 YPEL1O60688 119 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 SCTP09683 121 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 CLEC2LP0C7M8 214 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 ZNF137PP52743 207 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 HLA-DRB3P79483 266 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 MXD1Q05195 221 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 MOB1BQ7L9L4 216 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 ZNF554Q86TJ5 538 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 C1QL4Q86Z23 238 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 OR2AK2Q8NG84 335 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 OR2T10Q8NGZ9 312 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 NOL4LQ96MY1 436 aaPredicted RBP11.66□□□□□ -0.54
ATG4B-224ENST00000494132 YPEL2Q96QA6 119 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 MRPL20Q9BYC9 149 aaKnown RBP11.66□□□□□ -0.54
ATG4B-224ENST00000494132 Q9N2K0 584 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 C12orf4Q9NQ89 552 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 SLC23A1Q9UHI7 598 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 SSR3Q9UNL2 185 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 KCNK7Q9Y2U2 307 aa11.66□□□□□ -0.54
ATG4B-224ENST00000494132 SAA2-SAA4A0A096LPE2 208 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 LINC01548A6NM66 108 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 ADARB2-AS1A8MUL3 147 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 RGS11O94810 467 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 SAA2P0DJI9 122 aaPredicted RBP11.65□□□□□ -0.54
ATG4B-224ENST00000494132 GNB3P16520 340 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 GALP22466 123 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 GADD45AP24522 165 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 FGF9P31371 208 aaPredicted RBP11.65□□□□□ -0.54
ATG4B-224ENST00000494132 LSAMPQ13449 338 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 EBI3Q14213 229 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 KCTD21Q4G0X4 260 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 RPL39P5Q59GN2 51 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 TCTEX1D4Q5JR98 221 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 KHDC1LQ5JSQ8 128 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 Q8N6K4 173 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 MAFIPQ8WZ33 124 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 R3HDM4Q96D70 268 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 RAB3CQ96E17 227 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 ABHD14BQ96IU4 210 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 IFI27L2Q9H2X8 130 aa11.65□□□□□ -0.54
ATG4B-224ENST00000494132 ELF5Q9UKW6 265 aaPredicted RBP11.65□□□□□ -0.54
ATG4B-224ENST00000494132 TRBV6-6A0A0A6YYG2 114 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 RAB27BO00194 218 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 FGF16O43320 207 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 TXNL1O43396 289 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 KCNAB3O43448 404 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 LANCL1O43813 399 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 MOSP00540 346 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 CD3GP09693 182 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 SNRPBP14678 240 aaKnown RBP11.64□□□□□ -0.55
ATG4B-224ENST00000494132 CD36P16671 472 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 CD1BP29016 333 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 F2RL1P55085 397 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 GLDNQ6ZMI3 551 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-224ENST00000494132 ZNF329Q86UD4 541 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 Q8N9W7 124 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 OR10R2Q8NGX6 335 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 RITA1Q96K30 269 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 ATG5Q9H1Y0 275 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 RIMS4Q9H426 269 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-224ENST00000494132 ZNF230Q9UIE0 474 aaPredicted RBP11.64□□□□□ -0.55
ATG4B-224ENST00000494132 DAPK2Q9UIK4 370 aa11.64□□□□□ -0.55
ATG4B-224ENST00000494132 NOTCH3Q9UM47 2321 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 IGKV1-6A0A0C4DH72 117 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 NOTOA8MTQ0 251 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 SERPINE3A8MV23 424 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 MFNGO00587 321 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 HSPA12AO43301 675 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 WIPF1O43516 503 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 RAB6AP20340 208 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 CNTFRP26992 372 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 SDC2P34741 201 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 TGFBR1P36897 503 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 CEACAM6P40199 344 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 MRPS15P82914 257 aaKnown RBP11.63□□□□□ -0.55
ATG4B-224ENST00000494132 CD83Q01151 205 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 DEFA6Q01524 100 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 STEAP3Q658P3 488 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 ZNF833PQ6ZTB9 187 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 SLC35E3Q7Z769 313 aa11.63□□□□□ -0.55
ATG4B-224ENST00000494132 NDUFA11Q86Y39 141 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms