RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ITPR1Q14643 2758 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 SHANK1Q9Y566 2161 aa9.76□□□□□ -0.85
RFC4-214ENST00000494047 TRAV24A0A0B4J272 114 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 IGKV1D-13A0A0B4J2D9 117 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 HLA-HP01893 362 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 IGKV1-13P0DP09 117 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 CDX1P47902 265 aaPredicted RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 RND2P52198 227 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 RPP30P78346 268 aaKnown RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 ICAM4Q14773 271 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 SLC10A1Q14973 349 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 LRRC75BQ2VPJ9 315 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 CXorf66Q5JRM2 361 aaPredicted RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 ZNF787Q6DD87 383 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 ADAM5Q6NVV9 412 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 Q6ZPA2 131 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 CENPVQ7Z7K6 275 aaPredicted RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 FAM24BQ8N5W8 94 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 ZNF645Q8N7E2 425 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 ZNF610Q8N9Z0 462 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 C1orf162Q8NEQ5 155 aaPredicted RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 NINJ1Q92982 152 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 RAB39BQ96DA2 213 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 TAAR6Q96RI8 345 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 CDH20Q9HBT6 801 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 KCNIP2Q9NS61 270 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 PSENENQ9NZ42 101 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 ERRFI1Q9UJM3 462 aaPredicted RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 TRAPPC2LQ9UL33 140 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 LIPGQ9Y5X9 500 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 IGSF10Q6WRI0 2623 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 COL6A6A6NMZ7 2263 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 NCKAP5O14513 1909 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 TRBV24-1A0A075B6N3 115 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 OOEPA6NGQ2 149 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 IQCF6A8MYZ5 107 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 C17orf112F2Z3M2 114 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 IFNL4K9M1U5 179 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 GPR37O15354 613 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 FABP1P07148 127 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 SP1P08047 785 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 PGA5P0DJD9 388 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 SFTPCP11686 197 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 HOXA5P20719 270 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 OMGP23515 440 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 ITGA3P26006 1051 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 HOXC12P31275 282 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 FHITP49789 147 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 UBE2NP61088 152 aaKnown RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 ERVK11-1P61568 191 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 NKX6-1P78426 367 aaPredicted RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 DLK1P80370 383 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 KIAA0141Q14154 515 aaPredicted RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 BRICD5Q6PL45 260 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 ZNF66Q6ZN08 573 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 LURAP1LQ8IV03 231 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 ZFP82Q8N141 532 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 TMEM251Q8N6I4 163 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 NAXEQ8NCW5 288 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 OR51H1Q8NH63 302 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 PRR7Q8TB68 274 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 BCL2L2Q92843 193 aaPredicted RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 GPR146Q96CH1 333 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 BSCL2Q96G97 398 aaPredicted RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 PARP12Q9H0J9 701 aaKnown RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 ZNF552Q9H707 407 aaPredicted RBP9.75□□□□□ -0.85
RFC4-214ENST00000494047 CHODLQ9H9P2 273 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 OBP2BQ9NPH6 170 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 CACNG5Q9UF02 275 aa9.75□□□□□ -0.85
RFC4-214ENST00000494047 IGKV1-6A0A0C4DH72 117 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 A0A1W2PPE2 198 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 C1QL1O75973 258 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 CST7O76096 145 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 PSG2P11465 335 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 RPS10P46783 165 aaKnown RBP9.74□□□□□ -0.85
RFC4-214ENST00000494047 PAX9P55771 341 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 ZNF154Q13106 437 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 SSX2Q16385 188 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 TMEM249Q2WGJ8 235 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 SLC35E4Q6ICL7 350 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 SPINK14Q6IE38 97 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 Q6P435 159 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 TIPARPQ7Z3E1 657 aaKnown RBP9.74□□□□□ -0.85
RFC4-214ENST00000494047 VASH2Q86V25 355 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 THNSL2Q86YJ6 484 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 TGIF2LYQ8IUE0 185 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 ZNF525Q8N782 197 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 TMEM217Q8N7C4 229 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 CYB561D1Q8N8Q1 229 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 GALMQ96C23 342 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 TMEM147Q9BVK8 224 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 MRPL37Q9BZE1 423 aaKnown RBP9.74□□□□□ -0.85
RFC4-214ENST00000494047 WDR61Q9GZS3 305 aaKnown RBP9.74□□□□□ -0.85
RFC4-214ENST00000494047 GAR1Q9NY12 217 aaKnown RBP9.74□□□□□ -0.85
RFC4-214ENST00000494047 ZNF581Q9P0T4 197 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 HSPB7Q9UBY9 170 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 NAT8Q9UHE5 227 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 DMRT1Q9Y5R6 373 aa9.74□□□□□ -0.85
RFC4-214ENST00000494047 A0A096LPE4 126 aa9.73□□□□□ -0.85
RFC4-214ENST00000494047 CTXND1A0A1B0GTU2 59 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms