RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 RNF7Q9UBF6 113 aa8.41□□□□□ -1.06
PRPF3-206ENST00000493553 OR14J1Q9UGF5 321 aa8.41□□□□□ -1.06
PRPF3-206ENST00000493553 ERRFI1Q9UJM3 462 aaPredicted RBP8.41□□□□□ -1.06
PRPF3-206ENST00000493553 TLN1Q9Y490 2541 aaKnown RBP8.41□□□□□ -1.06
PRPF3-206ENST00000493553 IGKV1-6A0A0C4DH72 117 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 GPR137BO60478 399 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 PGLYRP1O75594 196 aaPredicted RBP8.4□□□□□ -1.06
PRPF3-206ENST00000493553 SCAF4O95104 1147 aaKnown RBP8.4□□□□□ -1.06
PRPF3-206ENST00000493553 SPDEFO95238 335 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 MUC1P15941 1255 aaPredicted RBP8.4□□□□□ -1.06
PRPF3-206ENST00000493553 RCC1P18754 421 aaPredicted RBP8.4□□□□□ -1.06
PRPF3-206ENST00000493553 RPL12P30050 165 aaKnown RBP8.4□□□□□ -1.06
PRPF3-206ENST00000493553 CEACAM6P40199 344 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 TNFAIP6P98066 277 aaPredicted RBP8.4□□□□□ -1.06
PRPF3-206ENST00000493553 FAM27E3Q08E93 113 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 SNTB1Q13884 538 aaKnown RBP8.4□□□□□ -1.06
PRPF3-206ENST00000493553 HERPUD1Q15011 391 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 FBXL19-AS1Q494R0 122 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 KRBOX4Q5JUW0 171 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 BATF2Q8N1L9 274 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 ZNF561Q8N587 486 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 EIF4E3Q8N5X7 224 aaKnown RBP8.4□□□□□ -1.06
PRPF3-206ENST00000493553 ST6GALNAC3Q8NDV1 305 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 OR1S1Q8NH92 325 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 ANGPTL6Q8NI99 470 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 PLPPR1Q8TBJ4 325 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 CD300LFQ8TDQ1 290 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 IL1F10Q8WWZ1 152 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 ASF1BQ9NVP2 202 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 NDRG3Q9UGV2 375 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 POMT1Q9Y6A1 747 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 DMDP11532 3685 aa8.4□□□□□ -1.06
PRPF3-206ENST00000493553 WDFY4Q6ZS81 3184 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 LEUTXA8MZ59 168 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 KRBOX1C9JBD0 128 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 ATP6V1G2-DDX39BF2Z307 99 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 TEX46H3BTG2 121 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 WRBO00258 174 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 ITGB1BP1O14713 200 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 CFDP00746 253 aaPredicted RBP8.39□□□□□ -1.07
PRPF3-206ENST00000493553 NMBP08949 121 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 NKX2-1P43699 371 aaPredicted RBP8.39□□□□□ -1.07
PRPF3-206ENST00000493553 OR3A1P47881 315 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 ARHGDIBP52566 201 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 VAMP2P63027 116 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 CR1LQ2VPA4 569 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 PRAMEF6Q5VXH4 476 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 ALKAL2Q6UX46 152 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 MEX3BQ6ZN04 569 aaKnown RBP8.39□□□□□ -1.07
PRPF3-206ENST00000493553 ZNF66Q6ZN08 573 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 Q6ZPA2 131 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 ZNF818PQ6ZRF7 136 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 LYZL2Q7Z4W2 148 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 HSD17B13Q7Z5P4 300 aaPredicted RBP8.39□□□□□ -1.07
PRPF3-206ENST00000493553 COMMD7Q86VX2 200 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 SELENOHQ8IZQ5 122 aaKnown RBP8.39□□□□□ -1.07
PRPF3-206ENST00000493553 SLC35G3Q8N808 338 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 SAT2Q96F10 170 aaPredicted RBP8.39□□□□□ -1.07
PRPF3-206ENST00000493553 RRNAD1Q96FB5 475 aaKnown RBP8.39□□□□□ -1.07
PRPF3-206ENST00000493553 OR2V2Q96R30 315 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 DMRTA2Q96SC8 542 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 CCL28Q9NRJ3 127 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 UFSP2Q9NUQ7 469 aa8.39□□□□□ -1.07
PRPF3-206ENST00000493553 POLEQ07864 2286 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 ZSCAN5BA6NJL1 495 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 FAM90A26D6RGX4 464 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 H0YIZ8 118 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 HSD17B6O14756 317 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 LHBP01229 141 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 MBPP02686 304 aaPredicted RBP8.38□□□□□ -1.07
PRPF3-206ENST00000493553 CHRNB4P30926 498 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 CA7P43166 264 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 GABRA2P47869 451 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 RAB5CP51148 216 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 RAB7AP51149 207 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 BLOC1S1P78537 153 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 COL10A1Q03692 680 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 BAXQ07812 192 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 SP6Q3SY56 376 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 UQCC3Q6UW78 93 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 ZNF826PQ6ZT77 177 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 RPRMLQ8N4K4 120 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 GCSAMQ8N6F7 178 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 ZNF645Q8N7E2 425 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 OR4D5Q8NGN0 318 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 RNASE11Q8TAA1 199 aaKnown RBP8.38□□□□□ -1.07
PRPF3-206ENST00000493553 FAM222BQ8WU58 562 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 SDSLQ96GA7 329 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 RAB40CQ96S21 281 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 TP53RKQ96S44 253 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 HSD17B10Q99714 261 aaKnown RBP8.38□□□□□ -1.07
PRPF3-206ENST00000493553 SPATA25Q9BR10 227 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 CDIP1Q9H305 208 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 MS4A5Q9H3V2 200 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 COA4Q9NYJ1 87 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 COQ3Q9NZJ6 369 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 LPAR3Q9UBY5 353 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 JPT1Q9UK76 154 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 FZR1Q9UM11 496 aa8.38□□□□□ -1.07
PRPF3-206ENST00000493553 LSM5Q9Y4Y9 91 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms