RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 SERPINE3A8MV23 424 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 OOSP1A8MZH6 123 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 MFNGO00587 321 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 ITGB1BP1O14713 200 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 SCGNO76038 276 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 TPPPO94811 219 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 SLC2A2P11168 524 aaPredicted RBP5.43□□□□□ -1.54
VPS52-219ENST00000493379 CDK2P24941 298 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 ZNF137PP52743 207 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 TMBIM6P55061 237 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 DLX1P56177 255 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 RAB32Q13637 225 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 EDDM3AQ14507 147 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 ATXN7L3Q14CW9 347 aaPredicted RBP5.43□□□□□ -1.54
VPS52-219ENST00000493379 SLC9A3R2Q15599 337 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 HMGN3Q15651 99 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 AWAT1Q58HT5 328 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 HES5Q5TA89 166 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 GPR107Q5VW38 600 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 C11orf87Q6NUJ2 197 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 BRD3OSQ6XYD6 125 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 C6orf201Q7Z4U5 140 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 ABHD12Q8N2K0 398 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 PNKDQ8N490 385 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 OR4P4Q8NGL7 312 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 ST6GALNAC6Q969X2 333 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 CREB3L1Q96BA8 519 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 SLC25A38Q96DW6 304 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 SLC6A7Q99884 636 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 CLEC7AQ9BXN2 247 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 PECRQ9BY49 303 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 KCNK15Q9H427 330 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 RAB9BQ9NP90 201 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 PLEKHJ1Q9NW61 149 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 ETAA1Q9NY74 926 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 IDI2-AS1Q9NZ38 188 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 ZNRD1Q9P1U0 126 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 MGAT4AQ9UM21 535 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 ETV7Q9Y603 341 aa5.43□□□□□ -1.54
VPS52-219ENST00000493379 SOX21Q9Y651 276 aaPredicted RBP5.43□□□□□ -1.54
VPS52-219ENST00000493379 A0A087WWL8 130 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 A0A0B4J203 849 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 A0A0U1RQK1 487 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 LOC100506127A0A0U1RQW1 187 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 ZNF785A8K8V0 405 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 C12orf77C9JDV5 145 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 NPIPB6E9PJ23 425 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 BUB1B-PAK6H3BSN5 160 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 J3QR06 171 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 YPEL1O60688 119 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 PAHP00439 452 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 PRB2P02812 416 aaPredicted RBP5.42□□□□□ -1.54
VPS52-219ENST00000493379 FBP1P09467 338 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 RCC1P18754 421 aaPredicted RBP5.42□□□□□ -1.54
VPS52-219ENST00000493379 SAA4P35542 130 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 TGFBR1P36897 503 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 VEGFCP49767 419 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 PRRX1P54821 245 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 UCP3P55916 312 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 UBA52P62987 128 aaKnown RBP5.42□□□□□ -1.54
VPS52-219ENST00000493379 KLRD1Q13241 179 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 HLA-DRB5Q30154 266 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 MOGAT2Q3SYC2 334 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 ZNF260Q3ZCT1 412 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 UTF1Q5T230 341 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 C6orf183Q5T699 404 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 RUSC1-AS1Q66K80 236 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 C16orf87Q6PH81 154 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 BAIAP2L2Q6UXY1 529 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 MOB1BQ7L9L4 216 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 DYNAPQ8N1N2 210 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 SIGLECL1Q8N7X8 197 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 ZNF439Q8NDP4 499 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 OR9G1Q8NH87 305 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 MRGPRDQ8TDS7 321 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 C17orf50Q8WW18 174 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 SSMEM1Q8WWF3 244 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 RAB3CQ96E17 227 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 ARHGAP5-AS1Q96IT6 56 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 CYYR1Q96J86 154 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 YPEL2Q96QA6 119 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 TINAGL1Q9GZM7 467 aaPredicted RBP5.42□□□□□ -1.54
VPS52-219ENST00000493379 NAA50Q9GZZ1 169 aaKnown RBP5.42□□□□□ -1.54
VPS52-219ENST00000493379 DCSTAMPQ9H295 470 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 GHITMQ9H3K2 345 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 Q9N2K0 584 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 DPM3Q9P2X0 92 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 DAPK2Q9UIK4 370 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 PSG11Q9UQ72 335 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 KIAA2026Q5HYC2 2103 aa5.42□□□□□ -1.54
VPS52-219ENST00000493379 IGHV3OR16-10A0A075B7F0 116 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 MEIOCA2RUB1 952 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 TRIM77I1YAP6 450 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 ZNF701M0R085 212 aaPredicted RBP5.41□□□□□ -1.54
VPS52-219ENST00000493379 HSPB6O14558 160 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 SPINT2O43291 252 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 HBZP02008 142 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 HIST1H1DP16402 221 aaKnown RBP5.41□□□□□ -1.54
VPS52-219ENST00000493379 OMGP23515 440 aa5.41□□□□□ -1.54
VPS52-219ENST00000493379 DTYMKP23919 212 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms