RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 IGHV1-3A0A0C4DH29 117 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 LOC100506127A0A0U1RQW1 187 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 CCDC160A6NGH7 325 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 SLC25A17O43808 307 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 OCM2P0CE71 109 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 OCMP0CE72 109 aaPredicted RBP8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 ZNF182P17025 639 aaPredicted RBP8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 FSTP19883 344 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 IL3RAP26951 378 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 CD1BP29016 333 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 GLP1RP43220 463 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 MTNR1BP49286 362 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 SCN1BQ07699 218 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 PDZK1IP1Q13113 114 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 SRSF7Q16629 238 aaKnown RBP eCLIP8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 CEACAM19Q7Z692 300 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 NR2C2APQ86WQ0 139 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 PARP16Q8N5Y8 322 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 Q8N6K4 173 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 ZNF491Q8N8L2 437 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 MYOZ3Q8TDC0 251 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 DCUN1D4Q92564 292 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 SPSB1Q96BD6 273 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 COQ2Q96H96 371 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 OR14A2Q96R54 314 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 OR4C12Q96R67 309 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 S1PR3Q99500 378 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 BARHL1Q9BZE3 327 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 LINC00574Q9H8X3 128 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 CALYQ9NYX4 217 aa8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 MRPS28Q9Y2Q9 187 aaKnown RBP8.65□□□□□ -1.02
CLCNKA-206ENST00000491433 A0A075B6Q4 140 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 SLC33A1O00400 549 aaPredicted RBP8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 DEGS1O15121 323 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 ARPC1BO15143 372 aaKnown RBP8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 TXNL1O43396 289 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 NOL3O60936 208 aaKnown RBP8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 TMEM127O75204 238 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 ARL6IP5O75915 188 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 KDM4BO94953 1096 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 MOSP00540 346 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 CGB3P0DN86 165 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 CGB7P0DN87 165 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 IGHV4-30-4P0DP06 118 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 SRMP19623 302 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 MAPK3P27361 379 aaPredicted RBP8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 SDC2P34741 201 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 GNG10P50151 68 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 ACSM6Q6P461 480 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 UTS2BQ765I0 119 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 LRRTM1Q86UE6 522 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 SAXO1Q8IYX7 474 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 SLC25A46Q96AG3 418 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 GFI1Q99684 422 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 ING3Q9NXR8 418 aa8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 CCDC59Q9P031 241 aaKnown RBP8.64□□□□□ -1.03
CLCNKA-206ENST00000491433 MEIKINA0A087WXM9 373 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 LOC107986453A0A1B0GWG9 222 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 NPIPB11E5RHQ5 1161 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 LINC01619G3V211 115 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 HSPA12AO43301 675 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 CDRT1O95170 752 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 CLEC2LP0C7M8 214 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 CALCBP10092 127 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 ATF1P18846 271 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 KCNJ3P48549 501 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 SERPINB10P48595 397 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 PITPNAQ00169 270 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 LSAMPQ13449 338 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 DIAPH2-AS1Q14236 149 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 ATXN7L3Q14CW9 347 aaPredicted RBP8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 ODF4Q2M2E3 257 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 ASPHD1Q5U4P2 390 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 OR51T1Q8NGJ9 327 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 ELOVL1Q9BW60 279 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 GNB4Q9HAV0 340 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 C19orf73Q9NVV2 129 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 PLA2G2EQ9NZK7 142 aa8.63□□□□□ -1.03
CLCNKA-206ENST00000491433 TRAV8-7A0A075B6U6 113 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 H3BSH0 61 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 IGHV3-7P01780 117 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 MED14OSP0DP75 135 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 ZNF20P17024 532 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 PPIFP30405 207 aaKnown RBP8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 GNB1P62873 340 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 Q3ZCU0 254 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 HSD17B12Q53GQ0 312 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 Q6P435 159 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 CDH26Q8IXH8 852 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 LINC00311Q8N616 119 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 C8orf31Q8N9H6 132 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 OR13A1Q8NGR1 328 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 DLX4Q92988 240 aaPredicted RBP8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 LEAP2Q969E1 77 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 TMEM106AQ96A25 262 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 ZNF107Q9UII5 783 aaPredicted RBP8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 KIF25Q9UIL4 384 aa8.62□□□□□ -1.03
CLCNKA-206ENST00000491433 MUC4Q99102 2169 aa8.61□□□□□ -1.03
CLCNKA-206ENST00000491433 IGHV3-72A0A0B4J1Y9 119 aa8.61□□□□□ -1.03
CLCNKA-206ENST00000491433 GZMHP20718 246 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms