RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 VAMP5O95183 116 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 SERPINE2P07093 398 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 CCL4P13236 92 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 RPP25LQ8N5L8 163 aaKnown RBP16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 ZIC4Q8N9L1 334 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 OR51H1Q8NH63 302 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 SPACA9Q96E40 222 aaPredicted RBP16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 TMEM208Q9BTX3 173 aa16.48■□□□□ 0.23
SNAPC3-206ENST00000490969 IGLV3-12A0A075B6K2 115 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 KIR2DS1A0A191URI9 304 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 PATE4P0C8F1 98 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 PSG2P11465 335 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 KIR2DS4P43632 304 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 PSMB3P49720 205 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 KIR2DS1Q14954 304 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 TESK1Q15569 626 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 REPIN1Q9BWE0 567 aaKnown RBP16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 CACNG5Q9UF02 275 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 NAGKQ9UJ70 344 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 ZNF391Q9UJN7 358 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 GOLT1BQ9Y3E0 138 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 EML6Q6ZMW3 1958 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 KNTC1P50748 2209 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 LNP1A1A4G5 178 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 OR6C6A6NF89 314 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 DLEU1O43261 78 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 IGKV1D-33P01593 117 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 IGKV1-33P01594 117 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 SRP14P37108 136 aaKnown RBP16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 OR4C12Q96R67 309 aa16.47■□□□□ 0.23
SNAPC3-206ENST00000490969 ZNF816-ZNF321PA0A0X1KG74 233 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A10PA6NDY2 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A18PA6NE21 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A16PA6NEW6 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A20PA6NIJ5 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A8PA6NJQ4 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A7PA6NKC0 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A22PA8MWA6 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A12PA8MX19 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A5PA8MXJ8 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A23PA8MXZ1 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A15PP0C7V4 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A13PP0C7W8 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A14PP0C7W9 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 FAM90A24PP0C7X0 464 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 ZNF32P17041 273 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 S100GP29377 79 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 RPL29P47914 159 aaKnown RBP16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 BTNL3Q6UXE8 466 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 IL17BQ9UHF5 180 aa16.46■□□□□ 0.23
SNAPC3-206ENST00000490969 GYPAP02724 150 aa16.46■□□□□ 0.22
SNAPC3-206ENST00000490969 CTXN2P0C2S0 81 aa16.46■□□□□ 0.22
SNAPC3-206ENST00000490969 BCL3P20749 454 aa16.46■□□□□ 0.22
SNAPC3-206ENST00000490969 TAF15Q92804 592 aaKnown RBP eCLIP16.46■□□□□ 0.22
SNAPC3-206ENST00000490969 RASL10BQ96S79 203 aa16.46■□□□□ 0.22
SNAPC3-206ENST00000490969 RARRES3Q9UL19 164 aa16.46■□□□□ 0.22
SNAPC3-206ENST00000490969 ATP23Q9Y6H3 246 aa16.46■□□□□ 0.22
SNAPC3-206ENST00000490969 M0QZK8 103 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 NTN3O00634 580 aaPredicted RBP16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 HSPB6O14558 160 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 HMGB3O15347 200 aaKnown RBP16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 OR10J1P30954 320 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 PLA2G5P39877 138 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 CLDN15P56746 228 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 Q8NFD4 153 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 OR4F5Q8NH21 305 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 TECTBQ96PL2 329 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 OR4F4Q96R69 305 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 PARD6GQ9BYG4 376 aaPredicted RBP16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 PIGBOS1A0A0B4J2F0 54 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 UBE2L5PA0A1B0GUS4 154 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 RPLP1P05386 114 aaKnown RBP16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 KRTAP27-1Q3LI81 207 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 NEK7Q8TDX7 302 aa16.45■□□□□ 0.22
SNAPC3-206ENST00000490969 CD300LBA8K4G0 201 aa16.44■□□□□ 0.22
SNAPC3-206ENST00000490969 DKK1O94907 266 aa16.44■□□□□ 0.22
SNAPC3-206ENST00000490969 OR3A1P47881 315 aa16.44■□□□□ 0.22
SNAPC3-206ENST00000490969 KCNIP4Q6PIL6 250 aa16.44■□□□□ 0.22
SNAPC3-206ENST00000490969 HS3ST6Q96QI5 342 aa16.44■□□□□ 0.22
SNAPC3-206ENST00000490969 CHCHD2Q9Y6H1 151 aaPredicted RBP16.44■□□□□ 0.22
SNAPC3-206ENST00000490969 PCSK4Q6UW60 755 aa16.44■□□□□ 0.22
SNAPC3-206ENST00000490969 ZNF705AQ6ZN79 300 aaPredicted RBP16.44■□□□□ 0.22
SNAPC3-206ENST00000490969 ZNF573Q86YE8 665 aa16.44■□□□□ 0.22
SNAPC3-206ENST00000490969 GATAD1Q8WUU5 269 aa16.44■□□□□ 0.22
SNAPC3-206ENST00000490969 CBY1Q9Y3M2 126 aa16.44■□□□□ 0.22
SNAPC3-206ENST00000490969 A6NNC1 897 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 IGKV1-39P01597 117 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 IGKV1D-39P04432 117 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 B4GALT1P15291 398 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 LCN2P80188 198 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 PSG4Q00888 419 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 GAGE1Q13065 139 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 PRDX4Q13162 271 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 RAET1LQ5VY80 246 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 RABEPKQ7Z6M1 372 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 TMEM256Q8N2U0 113 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 MS4A10Q96PG2 267 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 SLC25A22Q9H936 323 aa16.43■□□□□ 0.22
SNAPC3-206ENST00000490969 TMEM38BQ9NVV0 291 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms