RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 RNASEK-C17orf49H0YIS7 233 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 H7C417 338 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 M0R2Z0 102 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 UBFD1O14562 309 aaKnown RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TP53I11O14683 189 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ARPC3O15145 178 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 DLEU1O43261 78 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF207O43670 478 aaKnown RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR1F1O43749 312 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SLC37A4O43826 429 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 PDE6DO43924 150 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 HPGDSO60760 199 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SCGB2A1O75556 95 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 EIF3GO75821 320 aaKnown RBP eCLIP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SCGNO76038 276 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 DIRAS3O95661 229 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 RAB36O95755 333 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 CYB5R3P00387 301 aaPredicted RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 HBE1P02100 147 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ALDOBP05062 364 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 FABP3P05413 133 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 CRYBA1P05813 215 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 C8GP07360 202 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TACSTD2P09758 323 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 IQCF3P0C7M6 154 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR8U9P0C7N5 309 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 PTHLHP12272 177 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 PIPP12273 146 aaPredicted RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 RPA2P15927 270 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 GGT1P19440 569 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 CSNK2A2P19784 350 aaPredicted RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 MMP11P24347 488 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 COL8A2P25067 703 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 F2RP25116 425 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 AK4P27144 223 aaPredicted RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 PSMB6P28072 239 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 GABRR2P28476 465 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 CD1CP29017 333 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 S100A3P33764 101 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ARL2P36404 184 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 GPX4P36969 197 aaPredicted RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 GUCA1AP43080 201 aaPredicted RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SULT1A2P50226 295 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 XKP51811 444 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 POLR2JP52435 117 aaKnown RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 AKR1C2P52895 323 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR4D2P58180 307 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TAS2R31P59538 309 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR2B8PP59922 312 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 LSM3P62310 102 aaKnown RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ACTG2P63267 376 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 PSPHP78330 225 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SLC35A2P78381 396 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 LIPEQ05469 1076 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TGM3Q08188 693 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ST3GAL4Q11206 333 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 MLLT11Q13015 90 aaPredicted RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 CHIT1Q13231 466 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 GPM6BQ13491 265 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TPBGQ13641 420 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 VGLL4Q14135 290 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF345Q14585 488 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR4D1Q15615 310 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 VAMP3Q15836 100 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ADIRFQ15847 76 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 PMCHL1Q16048 86 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 HIST3H3Q16695 136 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ACOT6Q3I5F7 207 aaPredicted RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 LGALSLQ3ZCW2 172 aaPredicted RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 GGTA1PQ4G0N0 100 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 PYCR3Q53H96 274 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 VAX1Q5SQQ9 334 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM69Q5SWH9 247 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SDHAF4Q5VUM1 108 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM244Q5VVB8 128 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 C22orf42Q6IC83 251 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR2T5Q6IEZ7 315 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 REEP3Q6NUK4 255 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 DNAJC24Q6P3W2 148 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 KCNIP4Q6PIL6 250 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM107Q6UX40 140 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 CD300LGQ6UXG3 332 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 C12orf54Q6X4T0 127 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 FBXW12Q6X9E4 464 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 SPNS3Q6ZMD2 512 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF705AQ6ZN79 300 aaPredicted RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 FAM183BPQ6ZVS7 135 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 COMMD6Q7Z4G1 85 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 TMEM135Q86UB9 458 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 ZNF573Q86YE8 665 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 RBM45Q8IUH3 476 aaKnown RBP1.57□□□□□ -2.16
HMGN1-218ENST00000490032 GABRG1Q8N1C3 465 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 GPR26Q8NDV2 337 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR2M7Q8NG81 312 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR4M2Q8NGB6 313 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR51D1Q8NGF3 324 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR10W1Q8NGF6 305 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR5L1Q8NGL2 311 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR2T29Q8NH02 315 aa1.57□□□□□ -2.16
HMGN1-218ENST00000490032 OR8U1Q8NH10 309 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms