RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 IFNA2P01563 188 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 CCL3L1P16619 93 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 ATP5J2P56134 94 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 CD83Q01151 205 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 MORN2Q502X0 79 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 PRAMEF5Q5TYX0 476 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 ZNF787Q6DD87 383 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 CMTM1Q8IZ96 169 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 BVESQ8NE79 360 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 OR52M1Q8NGK5 317 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 NRGNQ92686 78 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 ST6GAL2Q96JF0 529 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 PSMG3-AS1Q96PY0 264 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 MGAT4CQ9UBM8 478 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 LRRK2Q5S007 2527 aa17.84■□□□□ 0.45
SMC4-221ENST00000489573 CXCL3P19876 107 aa17.83■□□□□ 0.45
SMC4-221ENST00000489573 S100GP29377 79 aa17.83■□□□□ 0.45
SMC4-221ENST00000489573 GNB2P62879 340 aa17.83■□□□□ 0.45
SMC4-221ENST00000489573 GALNT14Q96FL9 552 aa17.83■□□□□ 0.45
SMC4-221ENST00000489573 AKR1E2Q96JD6 320 aa17.83■□□□□ 0.45
SMC4-221ENST00000489573 A0A0B4J2A0 478 aa17.83■□□□□ 0.44
SMC4-221ENST00000489573 MPPED1O15442 326 aa17.83■□□□□ 0.44
SMC4-221ENST00000489573 ANXA3P12429 323 aa17.83■□□□□ 0.44
SMC4-221ENST00000489573 PAX1P15863 534 aa17.83■□□□□ 0.44
SMC4-221ENST00000489573 HEPN1Q6WQI6 88 aa17.83■□□□□ 0.44
SMC4-221ENST00000489573 ZNF645Q8N7E2 425 aa17.83■□□□□ 0.44
SMC4-221ENST00000489573 COQ8AQ8NI60 647 aa17.83■□□□□ 0.44
SMC4-221ENST00000489573 C8orf46Q8TAG6 207 aa17.83■□□□□ 0.44
SMC4-221ENST00000489573 BPESC1Q9GZL8 116 aa17.83■□□□□ 0.44
SMC4-221ENST00000489573 OR2D2Q9H210 308 aa17.83■□□□□ 0.44
SMC4-221ENST00000489573 SHPKQ9UHJ6 478 aa17.83■□□□□ 0.44
SMC4-221ENST00000489573 RPUSD1Q9UJJ7 312 aaKnown RBP17.83■□□□□ 0.44
SMC4-221ENST00000489573 KCNIP3Q9Y2W7 256 aa17.83■□□□□ 0.44
SMC4-221ENST00000489573 MMP23AO75900 390 aa17.82■□□□□ 0.44
SMC4-221ENST00000489573 IGLV2-14P01704 120 aa17.82■□□□□ 0.44
SMC4-221ENST00000489573 NFYBP25208 207 aa17.82■□□□□ 0.44
SMC4-221ENST00000489573 DLX6P56179 175 aa17.82■□□□□ 0.44
SMC4-221ENST00000489573 LY6G6FQ5SQ64 297 aa17.82■□□□□ 0.44
SMC4-221ENST00000489573 TBC1D26Q86UD7 250 aa17.82■□□□□ 0.44
SMC4-221ENST00000489573 SSBP3Q9BWW4 388 aaPredicted RBP17.82■□□□□ 0.44
SMC4-221ENST00000489573 RANGRFQ9HD47 186 aaPredicted RBP17.82■□□□□ 0.44
SMC4-221ENST00000489573 PSG11Q9UQ72 335 aa17.82■□□□□ 0.44
SMC4-221ENST00000489573 ITGB1BP1O14713 200 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 ST8SIA5O15466 376 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 SLC22A5O76082 557 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 OR5AC1P0C628 307 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 MSMO1Q15800 293 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 ANKRD55Q3KP44 614 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 ESCO2Q56NI9 601 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 LIN54Q6MZP7 749 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 DRAM1Q8N682 238 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 ZBTB34Q8NCN2 500 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 FAM168AQ92567 244 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 MARVELD3Q96A59 401 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 PIMREGQ9BSJ6 248 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 SUCNR1Q9BXA5 334 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 RNF150Q9ULK6 438 aa17.81■□□□□ 0.44
SMC4-221ENST00000489573 LRBAP50851 2863 aa17.8■□□□□ 0.44
SMC4-221ENST00000489573 PTPN13Q12923 2485 aa17.8■□□□□ 0.44
SMC4-221ENST00000489573 A0A1W2PPH5 198 aa17.8■□□□□ 0.44
SMC4-221ENST00000489573 GOSR2O14653 212 aa17.8■□□□□ 0.44
SMC4-221ENST00000489573 TNFSF12O43508 249 aa17.8■□□□□ 0.44
SMC4-221ENST00000489573 PGLYRP1O75594 196 aaPredicted RBP17.8■□□□□ 0.44
SMC4-221ENST00000489573 IGHV2-5P01817 119 aa17.8■□□□□ 0.44
SMC4-221ENST00000489573 HNRNPCP07910 306 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMC4-221ENST00000489573 C2orf68Q2NKX9 166 aa17.8■□□□□ 0.44
SMC4-221ENST00000489573 KCTD9Q7L273 389 aa17.8■□□□□ 0.44
SMC4-221ENST00000489573 RAB39BQ96DA2 213 aa17.8■□□□□ 0.44
SMC4-221ENST00000489573 PERPQ96FX8 193 aa17.8■□□□□ 0.44
SMC4-221ENST00000489573 GSX2Q9BZM3 304 aa17.8■□□□□ 0.44
SMC4-221ENST00000489573 PRR13Q9NZ81 148 aa17.8■□□□□ 0.44
SMC4-221ENST00000489573 C3orf85A0A1B0GTC6 90 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 NDUFS8O00217 210 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 PHF1O43189 567 aaPredicted RBP17.79■□□□□ 0.44
SMC4-221ENST00000489573 RAB7AP51149 207 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 C11orf91Q3C1V1 193 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 CLEC2AQ6UVW9 174 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 FYTTD1Q96QD9 318 aaKnown RBP17.79■□□□□ 0.44
SMC4-221ENST00000489573 AGMATQ9BSE5 352 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 ABHD14AQ9BUJ0 271 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 ZNF436Q9C0F3 470 aaPredicted RBP17.79■□□□□ 0.44
SMC4-221ENST00000489573 DOPEY2Q9Y3R5 2298 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 PPIAL4CA0A0B4J2A2 164 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 DBX1A6NMT0 343 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 C22orf46C9J442 243 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 BOLA2-SMG1P6H3BVE0 249 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 IGHV3-7P01780 117 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 PPIAL4GP0DN37 164 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 TMEM187Q14656 261 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 SP6Q3SY56 376 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 UTF1Q5T230 341 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 TCTE3Q8IZS6 198 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 ZNF439Q8NDP4 499 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 LY6G5BQ8NDX9 201 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 CLDND2Q8NHS1 167 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 C10orf105Q8TEF2 133 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 LEAP2Q969E1 77 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 ABHD14BQ96IU4 210 aa17.79■□□□□ 0.44
SMC4-221ENST00000489573 C17orf98A8MV24 154 aa17.78■□□□□ 0.44
SMC4-221ENST00000489573 SLC31A2O15432 143 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms