RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 TMEM235A6NFC5 223 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 POM121CA8CG34 1229 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 IGKV1D-33P01593 117 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 IGKV1-33P01594 117 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 IL3RAP26951 378 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 RPS19P39019 145 aaKnown RBP9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 RANBP1P43487 201 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 OR3A3P47888 321 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 SERPINB10P48595 397 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 RAB7AP51149 207 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 VBP1P61758 197 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 HTD2P86397 168 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 ZNF816Q0VGE8 651 aaPredicted RBP9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 ARFRP1Q13795 201 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 HERPUD1Q15011 391 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 SHISA2Q6UWI4 295 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 ODF3L1Q8IXM7 274 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 OR8H3Q8N146 312 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 C8orf31Q8N9H6 132 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 NUDCD2Q8WVJ2 157 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 RTN4IP1Q8WWV3 396 aaPredicted RBP9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 PTX4Q96A99 478 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 MRPS26Q9BYN8 205 aaKnown RBP9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 IFI27L2Q9H2X8 130 aa9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 RIMS4Q9H426 269 aaPredicted RBP9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 RANBP3Q9H6Z4 567 aaPredicted RBP9.8□□□□□ -0.84
SMARCD3-213ENST00000489503 IGKV1D-8A0A087WSZ0 117 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 SAA2-SAA4A0A096LPE2 208 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 FAM90A9PA6NNJ1 464 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 YPEL1O60688 119 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 OR2F2O95006 317 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 GAPDHP04406 335 aaKnown RBP9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 SAA2P0DJI9 122 aaPredicted RBP9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 VSIG10L2P0DP72 767 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 TMEM11P17152 192 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 KIR2DS4P43632 304 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 MRPS15P82914 257 aaKnown RBP9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 Q3ZCU0 254 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 CDNFQ49AH0 187 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 TGIF2LXQ8IUE1 241 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 KLHDC1Q8N7A1 406 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 C11orf44Q8N8P7 122 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 DTX3Q8N9I9 347 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 OR2AK2Q8NG84 335 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 OR2T6Q8NHC8 308 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 RBM14Q96PK6 669 aaKnown RBP9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 YPEL2Q96QA6 119 aa9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 MRPL20Q9BYC9 149 aaKnown RBP9.79□□□□□ -0.84
SMARCD3-213ENST00000489503 TRDCB7Z8K6 153 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 FABP7O15540 132 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 HSPA12AO43301 675 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 RGS11O94810 467 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 AMY1AP04745 511 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 AMY2AP04746 511 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 GSTT2P0CG29 244 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 GSTT2BP0CG30 244 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 PTHLHP12272 177 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 ZNF137PP52743 207 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 ABCA11PQ4W5N1 156 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 RPL39P5Q59GN2 51 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 IGSF11Q5DX21 431 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 ARSJQ5FYB0 599 aaPredicted RBP9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 C9orf152Q5JTZ5 239 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 GPR107Q5VW38 600 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 STEAP3Q658P3 488 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 ABHD14BQ96IU4 210 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 SERTAD4Q9NUC0 356 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 MOB4Q9Y3A3 225 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 ETV7Q9Y603 341 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 FBN3Q75N90 2809 aa9.78□□□□□ -0.84
SMARCD3-213ENST00000489503 TRAV18A0A075B6X5 111 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 SERPINE3A8MV23 424 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 BET1O15155 118 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 SSX5O60225 188 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 TFAP2AP05549 437 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 FAM106CPP0CH98 169 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 TALDO1P37837 337 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 CEACAM6P40199 344 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 VDAC2P45880 294 aaPredicted RBP9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 ALDH3B2P48448 385 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 LSAMPQ13449 338 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 ZNF260Q3ZCT1 412 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 Q8N2B8 174 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 EAF1Q96JC9 268 aaPredicted RBP9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 CITED1Q99966 193 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 PRSS22Q9GZN4 317 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 C11orf54Q9H0W9 315 aaPredicted RBP9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 RNF150Q9ULK6 438 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 MGAT4AQ9UM21 535 aa9.77□□□□□ -0.85
SMARCD3-213ENST00000489503 LANCL1O43813 399 aa9.76□□□□□ -0.85
SMARCD3-213ENST00000489503 GABARAPO95166 117 aa9.76□□□□□ -0.85
SMARCD3-213ENST00000489503 FCER2P06734 321 aa9.76□□□□□ -0.85
SMARCD3-213ENST00000489503 LPLP06858 475 aa9.76□□□□□ -0.85
SMARCD3-213ENST00000489503 ZBTB25P24278 435 aa9.76□□□□□ -0.85
SMARCD3-213ENST00000489503 GNG2P59768 71 aa9.76□□□□□ -0.85
SMARCD3-213ENST00000489503 CTF1Q16619 201 aa9.76□□□□□ -0.85
SMARCD3-213ENST00000489503 HACD4Q5VWC8 232 aa9.76□□□□□ -0.85
SMARCD3-213ENST00000489503 GLDNQ6ZMI3 551 aaPredicted RBP9.76□□□□□ -0.85
SMARCD3-213ENST00000489503 ZNF833PQ6ZTB9 187 aa9.76□□□□□ -0.85
SMARCD3-213ENST00000489503 C16orf82Q7Z2V1 217 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms