RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 SDC2P34741 201 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 MXD1Q05195 221 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 PLA2G7Q13093 441 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 GNMTQ14749 295 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 TIMM50Q3ZCQ8 353 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 TREML4Q6UXN2 200 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 Q6ZS46 218 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 ZNF439Q8NDP4 499 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 OR10R2Q8NGX6 335 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 CFHR4Q92496 578 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 PTX4Q96A99 478 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 YPEL2Q96QA6 119 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 KRTAP3-3Q9BYR6 98 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 KRTAP3-2Q9BYR7 98 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 ATG5Q9H1Y0 275 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 SERTAD4Q9NUC0 356 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 MOB4Q9Y3A3 225 aa10.69□□□□□ -0.7
CCL28-202ENST00000489442 TRBV6-6A0A0A6YYG2 114 aa10.68□□□□□ -0.7
CCL28-202ENST00000489442 FOXI3A8MTJ6 420 aaPredicted RBP10.68□□□□□ -0.7
CCL28-202ENST00000489442 FBLN7Q53RD9 439 aa10.68□□□□□ -0.7
CCL28-202ENST00000489442 PLAC9Q5JTB6 97 aa10.68□□□□□ -0.7
CCL28-202ENST00000489442 ZNF880Q6PDB4 577 aa10.68□□□□□ -0.7
CCL28-202ENST00000489442 NR2C2APQ86WQ0 139 aa10.68□□□□□ -0.7
CCL28-202ENST00000489442 OR2T10Q8NGZ9 312 aa10.68□□□□□ -0.7
CCL28-202ENST00000489442 ST6GALNAC6Q969X2 333 aa10.68□□□□□ -0.7
CCL28-202ENST00000489442 SLC23A1Q9UHI7 598 aa10.68□□□□□ -0.7
CCL28-202ENST00000489442 SH2D7A6NKC9 451 aaPredicted RBP10.67□□□□□ -0.7
CCL28-202ENST00000489442 NCBP2LA6PVI3 153 aaKnown RBP10.67□□□□□ -0.7
CCL28-202ENST00000489442 GNB3P16520 340 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 ZBTB25P24278 435 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 CD1BP29016 333 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 TALDO1P37837 337 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 ZNF137PP52743 207 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 HLA-DRB3P79483 266 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 ARFRP1Q13795 201 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 ARL6IP1Q15041 203 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 C2orf68Q2NKX9 166 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 TMEM95Q3KNT9 176 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 MOGAT2Q3SYC2 334 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 SFXN4Q6P4A7 337 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 CENPVQ7Z7K6 275 aaPredicted RBP10.67□□□□□ -0.7
CCL28-202ENST00000489442 PHF21AQ96BD5 680 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 RNF167Q9H6Y7 350 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 Q9N2K0 584 aa10.67□□□□□ -0.7
CCL28-202ENST00000489442 SERPINE3A8MV23 424 aa10.66□□□□□ -0.7
CCL28-202ENST00000489442 TRDCB7Z8K6 153 aa10.66□□□□□ -0.7
CCL28-202ENST00000489442 LANCL1O43813 399 aa10.66□□□□□ -0.7
CCL28-202ENST00000489442 RRP9O43818 475 aaKnown RBP10.66□□□□□ -0.7
CCL28-202ENST00000489442 FBXO24O75426 580 aa10.66□□□□□ -0.7
CCL28-202ENST00000489442 MOSP00540 346 aa10.66□□□□□ -0.7
CCL28-202ENST00000489442 SCTP09683 121 aa10.66□□□□□ -0.7
CCL28-202ENST00000489442 SNRPBP14678 240 aaKnown RBP10.66□□□□□ -0.7
CCL28-202ENST00000489442 HIST1H1DP16402 221 aaKnown RBP10.66□□□□□ -0.7
CCL28-202ENST00000489442 CEACAM6P40199 344 aa10.66□□□□□ -0.7
CCL28-202ENST00000489442 LY6G6FQ5SQ64 297 aa10.66□□□□□ -0.7
CCL28-202ENST00000489442 IDNKQ5T6J7 187 aa10.66□□□□□ -0.7
CCL28-202ENST00000489442 Q6ZPA2 131 aa10.66□□□□□ -0.7
CCL28-202ENST00000489442 EDARADDQ8WWZ3 215 aa10.66□□□□□ -0.7
CCL28-202ENST00000489442 EAF1Q96JC9 268 aaPredicted RBP10.66□□□□□ -0.7
CCL28-202ENST00000489442 CENPOQ9BU64 300 aa10.66□□□□□ -0.7
CCL28-202ENST00000489442 NOTCH1P46531 2555 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 RAB27BO00194 218 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 ST8SIA5O15466 376 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 FGF16O43320 207 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 AIREO43918 545 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 AMY1AP04745 511 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 AMY2AP04746 511 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 CSF1P09603 554 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 CLEC2LP0C7M8 214 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 EBI3Q14213 229 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 IZUMO1Q8IYV9 350 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 C5orf56Q8N8D9 126 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 OR5AU1Q8NGC0 362 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 S1PR3Q99500 378 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 PIPOXQ9P0Z9 390 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 KCNK7Q9Y2U2 307 aa10.65□□□□□ -0.7
CCL28-202ENST00000489442 ZNF736B4DX44 427 aaPredicted RBP10.64□□□□□ -0.71
CCL28-202ENST00000489442 MFNGO00587 321 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 RAB29O14966 203 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 BET1O15155 118 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 SCGNO76038 276 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 CD28P10747 220 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 OR3A3P47888 321 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 LSM3P62310 102 aaKnown RBP10.64□□□□□ -0.71
CCL28-202ENST00000489442 KIR2DS1Q14954 304 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 CDNFQ49AH0 187 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 HIST2H2BDQ6DRA6 164 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 OR4A4PQ8NGN8 299 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 FAM110DQ8TAY7 271 aaPredicted RBP10.64□□□□□ -0.71
CCL28-202ENST00000489442 LGALS14Q8TCE9 139 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 RASL11BQ9BPW5 248 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 WNT10AQ9GZT5 417 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 MMP27Q9H306 513 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 GHITMQ9H3K2 345 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 OR1A1Q9P1Q5 309 aa10.64□□□□□ -0.71
CCL28-202ENST00000489442 SAA2-SAA4A0A096LPE2 208 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 FABP7O15540 132 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 FCGR3AP08637 254 aa10.63□□□□□ -0.71
CCL28-202ENST00000489442 SAA2P0DJI9 122 aaPredicted RBP10.63□□□□□ -0.71
CCL28-202ENST00000489442 SERPINB10P48595 397 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms