RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 IL3RAP26951 378 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 CALRP27797 417 aaKnown RBP4.12□□□□□ -1.75
SF3A3-207ENST00000488934 RAB7AP51149 207 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 DLX1P56177 255 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 MADCAM1Q13477 382 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 SSX2Q16385 188 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 TAF9Q16594 264 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 HLA-DRB5Q30154 266 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 Q3ZCU0 254 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 C1orf100Q5SVJ3 147 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 PRAMEF5Q5TYX0 476 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 RAB12Q6IQ22 244 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 UNQ9370/PRO34162Q6UXP9 181 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 OR2W3Q7Z3T1 314 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 OR2T6Q8NHC8 308 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 RPEQ96AT9 228 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 ORAI1Q96D31 301 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 COQ2Q96H96 371 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 NEDD4LQ96PU5 975 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 THAP7Q9BT49 309 aaPredicted RBP4.12□□□□□ -1.75
SF3A3-207ENST00000488934 URM1Q9BTM9 101 aaKnown RBP4.12□□□□□ -1.75
SF3A3-207ENST00000488934 TMEM59Q9BXS4 323 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 SELENOIQ9C0D9 397 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 MMP28Q9H239 520 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 C16orf95Q9H693 158 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 LINC00574Q9H8X3 128 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 VCX3AQ9NNX9 186 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 NDUFB11Q9NX14 153 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 CALYQ9NYX4 217 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 IDI2-AS1Q9NZ38 188 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 KCNIP1Q9NZI2 227 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 C1RLQ9NZP8 487 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 RCC2Q9P258 522 aaKnown RBP4.12□□□□□ -1.75
SF3A3-207ENST00000488934 DPM3Q9P2X0 92 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 TRAPPC2LQ9UL33 140 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 MGAT4AQ9UM21 535 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 TCF19Q9Y242 345 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 RRP15Q9Y3B9 282 aaKnown RBP4.12□□□□□ -1.75
SF3A3-207ENST00000488934 LRRC42Q9Y546 428 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 PEX16Q9Y5Y5 336 aa4.12□□□□□ -1.75
SF3A3-207ENST00000488934 FBN1P35555 2871 aaKnown RBP4.12□□□□□ -1.75
SF3A3-207ENST00000488934 MEX3AA1L020 520 aaKnown RBP4.11□□□□□ -1.75
SF3A3-207ENST00000488934 NPIPB11E5RHQ5 1161 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 BUB1B-PAK6H3BSN5 160 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 M0QZ24 198 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 AP4M1O00189 453 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 SDCBPO00560 298 aaPredicted RBP4.11□□□□□ -1.75
SF3A3-207ENST00000488934 SLC17A2O00624 439 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 SLC22A1O15245 554 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 PIN1P1O15428 100 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 TXNL1O43396 289 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 PDCD6O75340 191 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 PEX14O75381 377 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 RGS11O94810 467 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 IGLV1-47P01700 117 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 FAM106CPP0CH98 169 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 ARSBP15848 533 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 MDKP21741 143 aaPredicted RBP4.11□□□□□ -1.75
SF3A3-207ENST00000488934 OMGP23515 440 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 PSMB9P28065 219 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 SSTR5P35346 364 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 MRPS15P82914 257 aaKnown RBP4.11□□□□□ -1.75
SF3A3-207ENST00000488934 PRB3Q04118 309 aaPredicted RBP4.11□□□□□ -1.75
SF3A3-207ENST00000488934 EMX1Q04741 257 aaPredicted RBP4.11□□□□□ -1.75
SF3A3-207ENST00000488934 RAB11BQ15907 218 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 C17orf58Q2M2W7 97 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 ZNF66Q6ZN08 573 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 ZNF497Q6ZNH5 498 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 MOB1BQ7L9L4 216 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 RNF144BQ7Z419 303 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 LHFPL4Q7Z7J7 247 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 LRRTM1Q86UE6 522 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 LYPD6Q86Y78 171 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 OR8H3Q8N146 312 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 C8orf31Q8N9H6 132 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 OR52M1Q8NGK5 317 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 OR4P4Q8NGL7 312 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 OR13A1Q8NGR1 328 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 OR10X1Q8NGY0 326 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 PLPPR1Q8TBJ4 325 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 MRGPRDQ8TDS7 321 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 TOMM40LQ969M1 308 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 ARL11Q969Q4 196 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 TMEM203Q969S6 136 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 CENPOQ9BU64 300 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 TM2D1Q9BX74 207 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 PRSS22Q9GZN4 317 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 PPIL3Q9H2H8 161 aaKnown RBP4.11□□□□□ -1.75
SF3A3-207ENST00000488934 RIMS4Q9H426 269 aaPredicted RBP4.11□□□□□ -1.75
SF3A3-207ENST00000488934 BANF2Q9H503 90 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 PLEKHJ1Q9NW61 149 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 ABRACLQ9P1F3 81 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 STEAP1Q9UHE8 339 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 JPT1Q9UK76 154 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 HILPDAQ9Y5L2 63 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 SOX21Q9Y651 276 aaPredicted RBP4.11□□□□□ -1.75
SF3A3-207ENST00000488934 V9GY05 133 aa4.11□□□□□ -1.75
SF3A3-207ENST00000488934 TET2Q6N021 2002 aaPredicted RBP4.11□□□□□ -1.75
SF3A3-207ENST00000488934 TRAV1-2A0A0B4J238 106 aa4.1□□□□□ -1.75
SF3A3-207ENST00000488934 TRDV1A0A1B0GX56 115 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms