RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 TRDCB7Z8K6 153 aa14.96□□□□□ -0.01
PTCD3-217ENST00000488801 SSX5O60225 188 aa14.96□□□□□ -0.01
PTCD3-217ENST00000488801 TSPAN9O75954 239 aa14.96□□□□□ -0.01
PTCD3-217ENST00000488801 KIR2DS4P43632 304 aa14.96□□□□□ -0.01
PTCD3-217ENST00000488801 KIR2DS1Q14954 304 aa14.96□□□□□ -0.01
PTCD3-217ENST00000488801 AWAT1Q58HT5 328 aa14.96□□□□□ -0.01
PTCD3-217ENST00000488801 CLVS1Q8IUQ0 354 aaPredicted RBP14.96□□□□□ -0.01
PTCD3-217ENST00000488801 OR4A4PQ8NGN8 299 aa14.96□□□□□ -0.01
PTCD3-217ENST00000488801 GCDHQ92947 438 aaPredicted RBP14.96□□□□□ -0.01
PTCD3-217ENST00000488801 CMTM3Q96MX0 182 aa14.96□□□□□ -0.01
PTCD3-217ENST00000488801 PARP12Q9H0J9 701 aaKnown RBP14.96□□□□□ -0.01
PTCD3-217ENST00000488801 ABCB10Q9NRK6 738 aa14.96□□□□□ -0.01
PTCD3-217ENST00000488801 OR1A1Q9P1Q5 309 aa14.96□□□□□ -0.01
PTCD3-217ENST00000488801 PLXNB1O43157 2135 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 IGKV1D-8A0A087WSZ0 117 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 FABP7O15540 132 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 XRCC3O43542 346 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 RGS11O94810 467 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 RAG2P55895 527 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 PITPNAQ00169 270 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 FOXL1Q12952 345 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 SPCS2Q15005 226 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 DHRS7BQ6IAN0 325 aaPredicted RBP14.95□□□□□ -0.02
PTCD3-217ENST00000488801 Q6ZSV7 163 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 SAMD12Q8N8I0 201 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 NUDCD2Q8WVJ2 157 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 RTN4IP1Q8WWV3 396 aaPredicted RBP14.95□□□□□ -0.02
PTCD3-217ENST00000488801 IL1F10Q8WWZ1 152 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 ACOT12Q8WYK0 555 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 AGMATQ9BSE5 352 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 RANBP3Q9H6Z4 567 aaPredicted RBP14.95□□□□□ -0.02
PTCD3-217ENST00000488801 RAB18Q9NP72 206 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 ZNF230Q9UIE0 474 aaPredicted RBP14.95□□□□□ -0.02
PTCD3-217ENST00000488801 SCOCQ9UIL1 159 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 PITPNC1Q9UKF7 332 aa14.95□□□□□ -0.02
PTCD3-217ENST00000488801 IGHV1-3A0A0C4DH29 117 aa14.94□□□□□ -0.02
PTCD3-217ENST00000488801 TIMM23O14925 209 aa14.94□□□□□ -0.02
PTCD3-217ENST00000488801 EIF4EP06730 217 aaKnown RBP14.94□□□□□ -0.02
PTCD3-217ENST00000488801 IL3RAP26951 378 aa14.94□□□□□ -0.02
PTCD3-217ENST00000488801 BRS3P32247 399 aa14.94□□□□□ -0.02
PTCD3-217ENST00000488801 RORCP51449 518 aa14.94□□□□□ -0.02
PTCD3-217ENST00000488801 ARHGDIBP52566 201 aa14.94□□□□□ -0.02
PTCD3-217ENST00000488801 MRPS15P82914 257 aaKnown RBP14.94□□□□□ -0.02
PTCD3-217ENST00000488801 ARFRP1Q13795 201 aa14.94□□□□□ -0.02
PTCD3-217ENST00000488801 THNSL2Q86YJ6 484 aa14.94□□□□□ -0.02
PTCD3-217ENST00000488801 IZUMO1Q8IYV9 350 aa14.94□□□□□ -0.02
PTCD3-217ENST00000488801 C16orf95Q9H693 158 aa14.94□□□□□ -0.02
PTCD3-217ENST00000488801 AUNIPQ9H7T9 357 aa14.94□□□□□ -0.02
PTCD3-217ENST00000488801 SLC23A1Q9UHI7 598 aa14.94□□□□□ -0.02
PTCD3-217ENST00000488801 TRBV6-7A0A0A0MS04 114 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 TXNL1O43396 289 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 LANCL1O43813 399 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 APOA1P02647 267 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 GSTT2P0CG29 244 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 GSTT2BP0CG30 244 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 MDKP21741 143 aaPredicted RBP14.93□□□□□ -0.02
PTCD3-217ENST00000488801 ZBTB25P24278 435 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 MNDAP41218 407 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 EBI3Q14213 229 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 FAM71F2Q6NXP2 309 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 ZNF833PQ6ZTB9 187 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 C16orf82Q7Z2V1 217 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 TMEM219Q86XT9 240 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 DRAM1Q8N682 238 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 OR2AK2Q8NG84 335 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 OR4F5Q8NH21 305 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 OR56B4Q8NH76 319 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 MAFIPQ8WZ33 124 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 ZNF251Q9BRH9 671 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 RBM38Q9H0Z9 239 aaKnown RBP14.93□□□□□ -0.02
PTCD3-217ENST00000488801 DIABLOQ9NR28 239 aa14.93□□□□□ -0.02
PTCD3-217ENST00000488801 TRAV18A0A075B6X5 111 aa14.92□□□□□ -0.02
PTCD3-217ENST00000488801 SAA2-SAA4A0A096LPE2 208 aa14.92□□□□□ -0.02
PTCD3-217ENST00000488801 A0A1B0GUS0 222 aa14.92□□□□□ -0.02
PTCD3-217ENST00000488801 H3BMQ9 156 aa14.92□□□□□ -0.02
PTCD3-217ENST00000488801 GAPDHP04406 335 aaKnown RBP14.92□□□□□ -0.02
PTCD3-217ENST00000488801 CRYBA1P05813 215 aa14.92□□□□□ -0.02
PTCD3-217ENST00000488801 SAA2P0DJI9 122 aaPredicted RBP14.92□□□□□ -0.02
PTCD3-217ENST00000488801 ZNF182P17025 639 aaPredicted RBP14.92□□□□□ -0.02
PTCD3-217ENST00000488801 GNG2P59768 71 aa14.92□□□□□ -0.02
PTCD3-217ENST00000488801 IGSF11Q5DX21 431 aa14.92□□□□□ -0.02
PTCD3-217ENST00000488801 Q8N2B8 174 aa14.92□□□□□ -0.02
PTCD3-217ENST00000488801 LINC01006Q8NI28 216 aa14.92□□□□□ -0.02
PTCD3-217ENST00000488801 DYNC2LI1Q8TCX1 351 aa14.92□□□□□ -0.02
PTCD3-217ENST00000488801 ISOC1Q96CN7 298 aa14.92□□□□□ -0.02
PTCD3-217ENST00000488801 S100A16Q96FQ6 103 aaKnown RBP14.92□□□□□ -0.02
PTCD3-217ENST00000488801 CEPT1Q9Y6K0 416 aa14.92□□□□□ -0.02
PTCD3-217ENST00000488801 ST8SIA5O15466 376 aa14.91□□□□□ -0.02
PTCD3-217ENST00000488801 OR2F2O95006 317 aa14.91□□□□□ -0.02
PTCD3-217ENST00000488801 SNRNP70P08621 437 aaKnown RBP14.91□□□□□ -0.02
PTCD3-217ENST00000488801 CD24P25063 80 aa14.91□□□□□ -0.02
PTCD3-217ENST00000488801 TALDO1P37837 337 aa14.91□□□□□ -0.02
PTCD3-217ENST00000488801 REG1BP48304 166 aa14.91□□□□□ -0.02
PTCD3-217ENST00000488801 LYG1Q8N1E2 194 aa14.91□□□□□ -0.02
PTCD3-217ENST00000488801 Q8N6K4 173 aa14.91□□□□□ -0.02
PTCD3-217ENST00000488801 EDARADDQ8WWZ3 215 aa14.91□□□□□ -0.02
PTCD3-217ENST00000488801 PHF21AQ96BD5 680 aa14.91□□□□□ -0.02
PTCD3-217ENST00000488801 RBM14Q96PK6 669 aaKnown RBP14.91□□□□□ -0.02
PTCD3-217ENST00000488801 C11orf54Q9H0W9 315 aaPredicted RBP14.91□□□□□ -0.02
PTCD3-217ENST00000488801 RDH8Q9NYR8 311 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms