RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 PSMB3P49720 205 aa13.87□□□□□ -0.19
MCF2L-229ENST00000488765 COMPP49747 757 aaPredicted RBP13.87□□□□□ -0.19
MCF2L-229ENST00000488765 PPP1CBP62140 327 aa13.87□□□□□ -0.19
MCF2L-229ENST00000488765 OOSP2Q86WS3 158 aa13.87□□□□□ -0.19
MCF2L-229ENST00000488765 OR8G5Q8NG78 346 aa13.87□□□□□ -0.19
MCF2L-229ENST00000488765 BCL2L2Q92843 193 aaPredicted RBP13.87□□□□□ -0.19
MCF2L-229ENST00000488765 WDYHV1Q96HA8 205 aa13.87□□□□□ -0.19
MCF2L-229ENST00000488765 CLUHP3Q96NS8 147 aa13.87□□□□□ -0.19
MCF2L-229ENST00000488765 PLSCR2Q9NRY7 297 aa13.87□□□□□ -0.19
MCF2L-229ENST00000488765 NPPCP23582 126 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 AMTP48728 403 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 ZNF133P52736 654 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-229ENST00000488765 RPL15P61313 204 aaKnown RBP13.86□□□□□ -0.19
MCF2L-229ENST00000488765 RPL19P84098 196 aaKnown RBP13.86□□□□□ -0.19
MCF2L-229ENST00000488765 RELBQ01201 579 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 ASB10Q8WXI3 467 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 SIGLEC12Q96PQ1 595 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 FBLN5Q9UBX5 448 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 PXMP4Q9Y6I8 212 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 OR7C1O76099 320 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-229ENST00000488765 NAPSAO96009 420 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 RAC2P15153 192 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 DEFB133Q30KQ1 61 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 ASPHD1Q5U4P2 390 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 DNM1P34Q6PK57 102 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 RNF2Q99496 336 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 TMEM222Q9H0R3 208 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 CCL28Q9NRJ3 127 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 NDUFB4O95168 129 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 TNFP01375 233 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 IER3P46695 156 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 CLRN1P58418 232 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 TMEM108Q6UXF1 575 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 Q6ZPA2 131 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.86□□□□□ -0.19
MCF2L-229ENST00000488765 SLC46A1Q96NT5 459 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 C11orf1Q9H5F2 150 aa13.86□□□□□ -0.19
MCF2L-229ENST00000488765 IGKV1D-13A0A0B4J2D9 117 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 TMEM238LA0A1B0GVL6 79 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 DUXBA0A1W2PPF3 345 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 IGKV1-13P0DP09 117 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 OR5D13Q8NGL4 314 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 BAHD1Q8TBE0 780 aaPredicted RBP13.85□□□□□ -0.19
MCF2L-229ENST00000488765 LMX1AQ8TE12 382 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 ORAOV1Q8WV07 137 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 SGCZQ96LD1 299 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 OR4C12Q96R67 309 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 KCNK17Q96T54 332 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 CSTL1Q9H114 145 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 CST9LQ9H4G1 147 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 TBL2Q9Y4P3 447 aaKnown RBP13.85□□□□□ -0.19
MCF2L-229ENST00000488765 A0A1W2PNR3 127 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 HLA-BQ31612 363 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 Q6ZRM9 215 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 OR10G4Q8NGN3 311 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 NUDT16L1Q9BRJ7 211 aaKnown RBP13.85□□□□□ -0.19
MCF2L-229ENST00000488765 ZNF891A8MT65 544 aaPredicted RBP13.85□□□□□ -0.19
MCF2L-229ENST00000488765 FOXI3A8MTJ6 420 aaPredicted RBP13.85□□□□□ -0.19
MCF2L-229ENST00000488765 SAP30O75446 220 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 IFNA1P01562 189 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 IGLC2P0DOY2 106 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 IGLC3P0DOY3 106 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 KIR2DS3Q14952 304 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 OCIAD2Q56VL3 154 aa13.85□□□□□ -0.19
MCF2L-229ENST00000488765 ZNF814B7Z6K7 855 aa13.84□□□□□ -0.19
MCF2L-229ENST00000488765 FCN1O00602 326 aa13.84□□□□□ -0.19
MCF2L-229ENST00000488765 RBFOX2O43251 390 aaKnown RBP eCLIP13.84□□□□□ -0.194e-6■■□□□ 14
MCF2L-229ENST00000488765 WNT2P09544 360 aa13.84□□□□□ -0.19
MCF2L-229ENST00000488765 TAAR3PQ9P1P4 343 aa13.84□□□□□ -0.19
MCF2L-229ENST00000488765 K7EP13 123 aa13.84□□□□□ -0.19
MCF2L-229ENST00000488765 ZXDAP98168 799 aa13.84□□□□□ -0.19
MCF2L-229ENST00000488765 EIF3IQ13347 325 aaKnown RBP13.84□□□□□ -0.19
MCF2L-229ENST00000488765 RAB30Q15771 203 aa13.84□□□□□ -0.19
MCF2L-229ENST00000488765 UQCR10Q9UDW1 63 aa13.84□□□□□ -0.19
MCF2L-229ENST00000488765 SCTP09683 121 aa13.83□□□□□ -0.19
MCF2L-229ENST00000488765 RANP62826 216 aaKnown RBP13.83□□□□□ -0.19
MCF2L-229ENST00000488765 PSG4Q00888 419 aa13.83□□□□□ -0.19
MCF2L-229ENST00000488765 ZNF90Q03938 601 aa13.83□□□□□ -0.19
MCF2L-229ENST00000488765 OR4A47Q6IF82 309 aa13.83□□□□□ -0.19
MCF2L-229ENST00000488765 ECI1P42126 302 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 ATP5G3P48201 142 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 PLCXD2Q0VAA5 305 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 RIPPLY2Q5TAB7 128 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 HAPLN4Q86UW8 402 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 GCNT2Q8N0V5 402 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 CCDC71LQ8N9Z2 235 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 OR5P3Q8WZ94 311 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 KLHDC7BQ96G42 594 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 MRPL18Q9H0U6 180 aaKnown RBP13.83□□□□□ -0.2
MCF2L-229ENST00000488765 IGHV2OR16-5A0A0B4J2B6 119 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 IGHV3-20A0A0C4DH32 117 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 J3QW42 95 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 OTX1P32242 354 aaPredicted RBP13.83□□□□□ -0.2
MCF2L-229ENST00000488765 LHX2P50458 406 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 GFRA1P56159 465 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 ID3Q02535 119 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 MYBPHQ13203 477 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 SPINK9Q5DT21 86 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 LRTM2Q8N967 370 aa13.83□□□□□ -0.2
MCF2L-229ENST00000488765 Q96M66 194 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms