RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 DIRAS3O95661 229 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 FSHBP01225 129 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 PTBP1P26599 531 aaKnown RBP eCLIP8.38□□□□□ -1.07
SKA1-204ENST00000488454 IL3RAP26951 378 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 HTR1DP28221 377 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 RCVRNP35243 200 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 CEACAM3P40198 252 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 LOXL3P58215 753 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 ACTBP60709 375 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 ACTG1P63261 375 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 MORN2Q502X0 79 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 IGSF11Q5DX21 431 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 RUSC1-AS1Q66K80 236 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 ZNF626Q68DY1 528 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 HCP5Q6MZN7 132 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 CDPF1Q6NVV7 123 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 RBMS3Q6XE24 437 aaKnown RBP8.38□□□□□ -1.07
SKA1-204ENST00000488454 BRD3OSQ6XYD6 125 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 Q6ZPA2 131 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 C5orf24Q7Z6I8 188 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 CCDC190Q86UF4 302 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 BEND2Q8NDZ0 799 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 OR52I2Q8NH67 350 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 NECAP2Q9NVZ3 263 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 ZNF69Q9UC07 566 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 PSG11Q9UQ72 335 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 TBL2Q9Y4P3 447 aaKnown RBP8.38□□□□□ -1.07
SKA1-204ENST00000488454 RBM7Q9Y580 266 aaKnown RBP8.38□□□□□ -1.07
SKA1-204ENST00000488454 WNK2Q9Y3S1 2297 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 ABCA2Q9BZC7 2435 aa8.38□□□□□ -1.07
SKA1-204ENST00000488454 TRBV6-7A0A0A0MS04 114 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 LEUTXA8MZ59 168 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 FAM157CP0CG43 387 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 SAA4P35542 130 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 PPP1CCP36873 323 aaKnown RBP8.37□□□□□ -1.07
SKA1-204ENST00000488454 ETV6P41212 452 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 RAB7AP51149 207 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 ARHGDIBP52566 201 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 TAS2R46P59540 309 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 ZNF45Q02386 682 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 SSBP1Q04837 148 aaKnown RBP8.37□□□□□ -1.07
SKA1-204ENST00000488454 LY6G6FQ5SQ64 297 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 MINOS1Q5TGZ0 78 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 LINC00299Q6ZSB3 139 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 C8orf31Q8N9H6 132 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 OR2AK2Q8NG84 335 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 OR5AP2Q8NGF4 316 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 OR5H2Q8NGV7 314 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 C22orf15Q8WYQ4 148 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 MALSU1Q96EH3 234 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 SOSTQ9BQB4 213 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 CABLES2Q9BTV7 478 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 MMP28Q9H239 520 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 TAS2R8Q9NYW2 309 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 OR1A1Q9P1Q5 309 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 DPM3Q9P2X0 92 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 KLK11Q9UBX7 282 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 MTFP1Q9UDX5 166 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 MINOS1-NBL1R4GNA1 71 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 ZANQ9Y493 2812 aa8.37□□□□□ -1.07
SKA1-204ENST00000488454 KIAA2026Q5HYC2 2103 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 IGKV1D-8A0A087WSZ0 117 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 IGKV1-6A0A0C4DH72 117 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 A0A0U1RQK1 487 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 A0A1W2PPE3 182 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 ODF3BA8MYP8 253 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 ZNF736B4DX44 427 aaPredicted RBP8.36□□□□□ -1.07
SKA1-204ENST00000488454 BUB1B-PAK6H3BSN5 160 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 PMP2P02689 132 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 IFNA6P05013 189 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 FBP1P09467 338 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 OR5H8P0DN80 308 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 NAT1P18440 290 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 HLA-DMAP28067 261 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 INPP1P49441 399 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 DGCR2P98153 550 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 GNMTQ14749 295 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 CDK10Q15131 360 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 HLA-DRB5Q30154 266 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 ACTBL2Q562R1 376 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 CT45A1Q5HYN5 189 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 C9orf139Q6ZV77 190 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 BCL6BQ8N143 479 aaPredicted RBP8.36□□□□□ -1.07
SKA1-204ENST00000488454 LINC00311Q8N616 119 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 CT45A3Q8NHU0 189 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 ZNF418Q8TF45 676 aaPredicted RBP8.36□□□□□ -1.07
SKA1-204ENST00000488454 SMIM4Q8WVI0 70 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 S100ZQ8WXG8 99 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 RPEQ96AT9 228 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 THAP7Q9BT49 309 aaPredicted RBP8.36□□□□□ -1.07
SKA1-204ENST00000488454 ABHD14AQ9BUJ0 271 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 GHITMQ9H3K2 345 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 RDH8Q9NYR8 311 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 ANAPC10Q9UM13 185 aa8.36□□□□□ -1.07
SKA1-204ENST00000488454 ITGB1BP1O14713 200 aa8.35□□□□□ -1.07
SKA1-204ENST00000488454 GSTZ1O43708 216 aaPredicted RBP8.35□□□□□ -1.07
SKA1-204ENST00000488454 IFNA2P01563 188 aa8.35□□□□□ -1.07
SKA1-204ENST00000488454 IGLV1-47P01700 117 aa8.35□□□□□ -1.07
SKA1-204ENST00000488454 CSF1P09603 554 aa8.35□□□□□ -1.07
SKA1-204ENST00000488454 FCGR2CP31995 323 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms