RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 AKR1C2P52895 323 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 CLDN12P56749 244 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 AP3S2P59780 193 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 MGAT3Q09327 533 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 MLLT11Q13015 90 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 CASP8Q14790 479 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 PAFAH1B3Q15102 231 aaKnown RBP1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 AKIRIN2Q53H80 203 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 FAM162BQ5T6X4 162 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 ELP2Q6IA86 826 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 TTC33Q6PID6 262 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 LRRN1Q6UXK5 716 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 ZBTB8OSQ8IWT0 167 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 OR52E4Q8NGH9 312 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 MFSD8Q8NHS3 518 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 ERMNQ8TAM6 284 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 PTH2Q96A98 100 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 RAD51AP1Q96B01 352 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 CCDC42Q96M95 316 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 TMEM208Q9BTX3 173 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 EBPLQ9BY08 206 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 SLC19A3Q9BZV2 496 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 OR2D2Q9H210 308 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 FAM206AQ9NX38 181 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 BTRCQ9Y297 605 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 NUP205Q92621 2012 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 NUP153P49790 1475 aaKnown RBP1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 AK9Q5TCS8 1911 aa1.74□□□□□ -2.13
HMGB1P36-201ENST00000487709 NLRC5Q86WI3 1866 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 ABCC11Q96J66 1382 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 A0A1B0GU33 70 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 TMEM114B3SHH9 223 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 CXCR6O00574 342 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 GPR171O14626 319 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 AZIN1O14977 448 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 TGOLN2O43493 480 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 DENRO43583 198 aaKnown RBP1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 IFNA6P05013 189 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 RPS17P08708 135 aaKnown RBP1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 CTXN2P0C2S0 81 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 OR12D1P0DN82 309 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 CD99P14209 185 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 GABRA1P14867 456 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 EVI2BP34910 448 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 CD79BP40259 229 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 INPP1P49441 399 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 MP68P56378 58 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 ACTBP60709 375 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 ACTG1P63261 375 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 TMED2Q15363 201 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 HLA-DRB5Q30154 266 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 SPOPLQ6IQ16 392 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 NOXRED1Q6NXP6 359 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 ZNF322Q6U7Q0 402 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 LYPD6Q86Y78 171 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 STX12Q86Y82 276 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 OR4P4Q8NGL7 312 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 TESCQ96BS2 214 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 VCX3BQ9H321 246 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 DMAC2Q9NW81 257 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 OR5V1Q9UGF6 321 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 ATPIF1Q9UII2 106 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 RPUSD1Q9UJJ7 312 aaKnown RBP1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 VPREB3Q9UKI3 123 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 GUCA1BQ9UMX6 200 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 SLC22A13Q9Y226 551 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 TP53TG1Q9Y2A0 90 aa1.73□□□□□ -2.13
HMGB1P36-201ENST00000487709 EVC2Q86UK5 1308 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 IGHV3OR15-7A0A075B7D8 119 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 TINCRA0A1B0GVN0 87 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 METTL15A6NJ78 407 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 C21orf140B9A014 251 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 F5H5T6 163 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 TMEM250H0YL14 139 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 KCNK1O00180 336 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 ACOX3O15254 700 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 ZNF73O43830 326 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 DCTN3O75935 186 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 OR5F1O95221 314 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 LYPLA2O95372 231 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 TYMSP04818 313 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 CFL1P23528 166 aaKnown RBP1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 IFNGR2P38484 337 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 OMPP47874 163 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 C1QTNF8P60827 252 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 RAB2AP61019 212 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 VBP1P61758 197 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 FAM3AP98173 230 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 MAPK14Q16539 360 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 ACSM3Q53FZ2 586 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 ACSBG2Q5FVE4 666 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 CST9Q5W186 159 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 WDR59Q6PJI9 974 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 CD200R1LQ6Q8B3 271 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 SPNS3Q6ZMD2 512 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 FAM19A5Q7Z5A7 132 aaPredicted RBP1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 TRAPPC5Q8IUR0 188 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 KRTCAP2Q8N6L1 136 aa1.72□□□□□ -2.13
HMGB1P36-201ENST00000487709 ZIC4Q8N9L1 334 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms