RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 MGAT4AQ9UM21 535 aa8.2□□□□□ -1.1
NEK4-204ENST00000487068 IGHV1-3A0A0C4DH29 117 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 LY6LH3BQJ8 138 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 LDLRAD4O15165 306 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 TXNL1O43396 289 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 OR2F2O95006 317 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 IGKV1D-33P01593 117 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 IGKV1-33P01594 117 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 TGFBR1P36897 503 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 VDAC2P45880 294 aaPredicted RBP8.19□□□□□ -1.1
NEK4-204ENST00000487068 SRSF4Q08170 494 aaKnown RBP8.19□□□□□ -1.1
NEK4-204ENST00000487068 ZNF816Q0VGE8 651 aaPredicted RBP8.19□□□□□ -1.1
NEK4-204ENST00000487068 HNF4GQ14541 408 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 Q3ZCU0 254 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 ABCA11PQ4W5N1 156 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 MORN2Q502X0 79 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 PDLIM3Q53GG5 364 aaPredicted RBP8.19□□□□□ -1.1
NEK4-204ENST00000487068 PLAC9Q5JTB6 97 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 STEAP3Q658P3 488 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 SLC25A48Q6ZT89 311 aaKnown RBP8.19□□□□□ -1.1
NEK4-204ENST00000487068 KLHDC1Q8N7A1 406 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 RTN4IP1Q8WWV3 396 aaPredicted RBP8.19□□□□□ -1.1
NEK4-204ENST00000487068 MOB4Q9Y3A3 225 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 TENM1Q9UKZ4 2725 aa8.19□□□□□ -1.1
NEK4-204ENST00000487068 MEGF8Q7Z7M0 2845 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 FOXI3A8MTJ6 420 aaPredicted RBP8.18□□□□□ -1.1
NEK4-204ENST00000487068 SERPINE3A8MV23 424 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 ST8SIA5O15466 376 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 SCGNO76038 276 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 FCGR3AP08637 254 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 HIST1H1DP16402 221 aaKnown RBP8.18□□□□□ -1.1
NEK4-204ENST00000487068 KIR2DS4P43632 304 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 TMEM50BP56557 158 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 PROK1P58294 105 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 HTD2P86397 168 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 ARL6IP1Q15041 203 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 TMEM95Q3KNT9 176 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 CT45A1Q5HYN5 189 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 PRR31Q5SQ13 230 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 C11orf88Q6PI97 169 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 LINC00311Q8N616 119 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 C11orf44Q8N8P7 122 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 C8orf31Q8N9H6 132 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 CT45A3Q8NHU0 189 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 MAFIPQ8WZ33 124 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 PTX4Q96A99 478 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 RBM14Q96PK6 669 aaKnown RBP8.18□□□□□ -1.1
NEK4-204ENST00000487068 ZNF702PQ9H963 129 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 Q9N2K0 584 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 RHBDL2Q9NX52 303 aa8.18□□□□□ -1.1
NEK4-204ENST00000487068 SAA2-SAA4A0A096LPE2 208 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 TRBV6-6A0A0A6YYG2 114 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 SH2D7A6NKC9 451 aaPredicted RBP8.17□□□□□ -1.1
NEK4-204ENST00000487068 NCBP2LA6PVI3 153 aaKnown RBP8.17□□□□□ -1.1
NEK4-204ENST00000487068 M0QZ24 198 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 M0QZK8 103 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 MFNGO00587 321 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 BET1O15155 118 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 YPEL1O60688 119 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 SCTP09683 121 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 SAA2P0DJI9 122 aaPredicted RBP8.17□□□□□ -1.1
NEK4-204ENST00000487068 ZBTB25P24278 435 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 SERPINB10P48595 397 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 GNG2P59768 71 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 KIR2DS1Q14954 304 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 FBLN7Q53RD9 439 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 ZNF880Q6PDB4 577 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 Q6ZPA2 131 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 IZUMO1Q8IYV9 350 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 ZNF439Q8NDP4 499 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 OR2T10Q8NGZ9 312 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 EDARADDQ8WWZ3 215 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 CFHR4Q92496 578 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 YIPF6Q96EC8 236 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 YPEL2Q96QA6 119 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 GINS4Q9BRT9 223 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 FUNDC2Q9BWH2 189 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 OR1A1Q9P1Q5 309 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 RBM7Q9Y580 266 aaKnown RBP8.17□□□□□ -1.1
NEK4-204ENST00000487068 ETV7Q9Y603 341 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 MGAM2Q2M2H8 2515 aa8.17□□□□□ -1.1
NEK4-204ENST00000487068 TMEM235A6NFC5 223 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 TRDCB7Z8K6 153 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 RAB27BO00194 218 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 FABP7O15540 132 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 FBXO24O75426 580 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 CEACAM6P40199 344 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 ZNF134P52741 427 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 BLCAPP62952 87 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 DEFA6Q01524 100 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 HERPUD1Q15011 391 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 KHDC1LQ5JSQ8 128 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 CROCCP3Q8IVE0 287 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 NUDCD2Q8WVJ2 157 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 S1PR3Q99500 378 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 CITED1Q99966 193 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 MRPL20Q9BYC9 149 aaKnown RBP8.16□□□□□ -1.1
NEK4-204ENST00000487068 MRPS26Q9BYN8 205 aaKnown RBP8.16□□□□□ -1.1
NEK4-204ENST00000487068 PIPOXQ9P0Z9 390 aa8.16□□□□□ -1.1
NEK4-204ENST00000487068 ZNF230Q9UIE0 474 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms