RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 C10orf128Q5T292 105 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF684Q5T5D7 378 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 THOC7Q6I9Y2 204 aaKnown RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 BAIAP2L2Q6UXY1 529 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 TMPRSS11AQ6ZMR5 421 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 AAED1Q7RTV5 226 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 LHFPL3Q86UP9 236 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 C20orf196Q8IYI0 205 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 KIR2DL5AQ8N109 375 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 SYS1Q8N2H4 156 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 CCDC71LQ8N9Z2 235 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 NOXO1Q8NFA2 376 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 SLC26A10Q8NG04 563 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 OR6K6Q8NGW6 343 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 OR6N1Q8NGY5 312 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 OR52N1Q8NH53 320 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 KIR2DL5BQ8NHK3 375 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 FNDC9Q8TBE3 224 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 MRAPQ8TCY5 172 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 ABHD3Q8WU67 409 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 TSEN15Q8WW01 171 aaKnown RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 BORCS5Q969J3 196 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 MARC2Q969Z3 335 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 ZMYND19Q96E35 227 aaPredicted RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 OR2M2Q96R28 347 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 MGLLQ99685 303 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 ATP5SQ99766 215 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 NICN1Q9BSH3 213 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 MND1Q9BWT6 205 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 LINC00470Q9BZP3 86 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 C20orf85Q9H1P6 137 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 PRORYQ9H606 182 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 RERGLQ9H628 205 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 MRPL22Q9NWU5 206 aaKnown RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 BABAM2Q9NXR7 383 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 EMC3Q9P0I2 261 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 RSL24D1Q9UHA3 163 aaKnown RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 LSM2Q9Y333 95 aaKnown RBP2.94□□□□□ -1.94
PTCD3-216ENST00000487043 TMEM14AQ9Y6G1 99 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF407Q9C0G0 2248 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 PTPRQQ9UMZ3 2332 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 ZFHX4Q86UP3 3567 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 KIAA1549Q9HCM3 1950 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 IGF2RP11717 2491 aa2.94□□□□□ -1.94
PTCD3-216ENST00000487043 DNAJC13O75165 2243 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 DMXL2Q8TDJ6 3036 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 ASPMQ8IZT6 3477 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 CHD8Q9HCK8 2581 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 FAM168BA1KXE4 195 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 METTL15A6NJ78 407 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 SLC22A20A6NK97 555 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 RPL36A-HNRNPH2H7BZ11 118 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 CCRL2O00421 344 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 SOX15O60248 233 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 SS18L1O75177 396 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF780AO75290 641 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 SULT1C4O75897 302 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 MPZL1O95297 269 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 TSPAN13O95857 204 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 IGHV2-5P01817 119 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 TACSTD2P09758 323 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 P0C879 139 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 GABRA1P14867 456 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF823P16415 610 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 CD36P16671 472 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 PSMA1P25786 263 aaKnown RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 PSMB9P28065 219 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 CD79BP40259 229 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 NAA10P41227 235 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 GUCA1AP43080 201 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 GLP1RP43220 463 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 RGS6P49758 472 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 TDGF1P3P51864 188 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 TMBIM6P55061 237 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 OR12D2P58182 307 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 LSM6P62312 80 aaKnown RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 ACTA2P62736 377 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 ACTG2P63267 376 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 GUSBP1Q15486 140 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 LY6G6FQ5SQ64 297 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 C1orf100Q5SVJ3 147 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 UTF1Q5T230 341 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 TSPO2Q5TGU0 170 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 FAM27BQ5VT28 67 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 GPR107Q5VW38 600 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF774Q6NX45 483 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 TMEM53Q6P2H8 277 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 RPL22L1Q6P5R6 122 aaKnown RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 DEGS2Q6QHC5 323 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 ZNF322Q6U7Q0 402 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 PLEKHG7Q6ZR37 379 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 LINC00299Q6ZSB3 139 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 SSX6Q7RTT6 188 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 CLVS1Q8IUQ0 354 aaPredicted RBP2.93□□□□□ -1.94
PTCD3-216ENST00000487043 MS4A15Q8N5U1 240 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 OR51S1Q8NGJ8 323 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 OR1S2Q8NGQ3 325 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 OR6N2Q8NGY6 317 aa2.93□□□□□ -1.94
PTCD3-216ENST00000487043 OR9G1Q8NH87 305 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms