RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 OR2T10Q8NGZ9 312 aa12.68□□□□□ -0.38
HDAC8-218ENST00000486704 PTX4Q96A99 478 aa12.68□□□□□ -0.38
HDAC8-218ENST00000486704 ARHGAP5-AS1Q96IT6 56 aa12.68□□□□□ -0.38
HDAC8-218ENST00000486704 EAF1Q96JC9 268 aaPredicted RBP12.68□□□□□ -0.38
HDAC8-218ENST00000486704 PECRQ9BY49 303 aa12.68□□□□□ -0.38
HDAC8-218ENST00000486704 TXNL4BQ9NX01 149 aaKnown RBP12.68□□□□□ -0.38
HDAC8-218ENST00000486704 HLA-DRB3P79483 266 aa12.67□□□□□ -0.38
HDAC8-218ENST00000486704 PLAC9Q5JTB6 97 aa12.67□□□□□ -0.38
HDAC8-218ENST00000486704 C5orf24Q7Z6I8 188 aa12.67□□□□□ -0.38
HDAC8-218ENST00000486704 ODF3L1Q8IXM7 274 aa12.67□□□□□ -0.38
HDAC8-218ENST00000486704 LYG1Q8N1E2 194 aa12.67□□□□□ -0.38
HDAC8-218ENST00000486704 OR2AK2Q8NG84 335 aa12.67□□□□□ -0.38
HDAC8-218ENST00000486704 HDHD3Q9BSH5 251 aaPredicted RBP12.67□□□□□ -0.38
HDAC8-218ENST00000486704 PLXNB1O43157 2135 aa12.67□□□□□ -0.38
HDAC8-218ENST00000486704 IGHV3-72A0A0B4J1Y9 119 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 ADARB2-AS1A8MUL3 147 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 ITGB1BP1O14713 200 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 MOSP00540 346 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 PLA2G7Q13093 441 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 LSAMPQ13449 338 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 HNF4GQ14541 408 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 FAM71F2Q6NXP2 309 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 ZNF833PQ6ZTB9 187 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 TPRA1Q86W33 373 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 OR5AU1Q8NGC0 362 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 OR8H1Q8NGG4 311 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 SETD6Q8TBK2 473 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 IL1F10Q8WWZ1 152 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 IFI27L2Q9H2X8 130 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 Q9N2K0 584 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 SSR3Q9UNL2 185 aa12.66□□□□□ -0.38
HDAC8-218ENST00000486704 NOTCH1P46531 2555 aa12.65□□□□□ -0.38
HDAC8-218ENST00000486704 SH2D7A6NKC9 451 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-218ENST00000486704 NOTOA8MTQ0 251 aa12.65□□□□□ -0.38
HDAC8-218ENST00000486704 GADD45AP24522 165 aa12.65□□□□□ -0.38
HDAC8-218ENST00000486704 CD83Q01151 205 aa12.65□□□□□ -0.38
HDAC8-218ENST00000486704 HIST2H2BDQ6DRA6 164 aa12.65□□□□□ -0.38
HDAC8-218ENST00000486704 RAB3CQ96E17 227 aa12.65□□□□□ -0.38
HDAC8-218ENST00000486704 CITED2Q99967 270 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-218ENST00000486704 CMSS1Q9BQ75 279 aaKnown RBP12.65□□□□□ -0.38
HDAC8-218ENST00000486704 LIN7CQ9NUP9 197 aaKnown RBP12.65□□□□□ -0.38
HDAC8-218ENST00000486704 KCNK7Q9Y2U2 307 aa12.65□□□□□ -0.38
HDAC8-218ENST00000486704 SAA2-SAA4A0A096LPE2 208 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 RAB27BO00194 218 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 MFNGO00587 321 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 IGHG2P01859 326 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 OPN1MWP04001 364 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 SAA2P0DJI9 122 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-218ENST00000486704 OPN1MW2P0DN77 364 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 OPN1MW3P0DN78 364 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 MOGAT2Q3SYC2 334 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 C9orf152Q5JTZ5 239 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 CENPVQ7Z7K6 275 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-218ENST00000486704 Q8N9W7 124 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 OR4X2Q8NGF9 303 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 OR10R2Q8NGX6 335 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 FAM110DQ8TAY7 271 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-218ENST00000486704 GHITMQ9H3K2 345 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 PLSCR3Q9NRY6 295 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 PIPOXQ9P0Z9 390 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 SLC23A1Q9UHI7 598 aa12.64□□□□□ -0.39
HDAC8-218ENST00000486704 A0A0B4J203 849 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 METTL21EPA6NDL7 271 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 SERPINE3A8MV23 424 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 ZNF736B4DX44 427 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-218ENST00000486704 HIST1H1DP16402 221 aaKnown RBP12.63□□□□□ -0.39
HDAC8-218ENST00000486704 ZBTB25P24278 435 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 NEDD8Q15843 81 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 NSUN5P1Q3KNT7 163 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 TCTEX1D4Q5JR98 221 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 FAM71E2Q8N5Q1 922 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 OR4F17Q8NGA8 305 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 CHPT1Q8WUD6 406 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 EDARADDQ8WWZ3 215 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 KCTD7Q96MP8 289 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 OR4F4Q96R69 305 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 NABP2Q9BQ15 211 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 MRPL20Q9BYC9 149 aaKnown RBP12.63□□□□□ -0.39
HDAC8-218ENST00000486704 ABCG5Q9H222 651 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 OR51E2Q9H255 320 aa12.63□□□□□ -0.39
HDAC8-218ENST00000486704 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC8-218ENST00000486704 SMIM30A4D0T7 59 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 NCBP2LA6PVI3 153 aaKnown RBP12.62□□□□□ -0.39
HDAC8-218ENST00000486704 RAB29O14966 203 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 TNFAIP8O95379 198 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 DIRAS3O95661 229 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 FCGR3AP08637 254 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 SCTP09683 121 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 CD3GP09693 182 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 SLC2A2P11168 524 aaPredicted RBP12.62□□□□□ -0.39
HDAC8-218ENST00000486704 MRPS15P82914 257 aaKnown RBP12.62□□□□□ -0.39
HDAC8-218ENST00000486704 ARL6IP1Q15041 203 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 SFXN4Q6P4A7 337 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 SLC35E3Q7Z769 313 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 OR4A4PQ8NGN8 299 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 S1PR3Q99500 378 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 ZNF251Q9BRH9 671 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 CHCHD6Q9BRQ6 235 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 AGMATQ9BSE5 352 aa12.62□□□□□ -0.39
HDAC8-218ENST00000486704 PARP12Q9H0J9 701 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms