RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 PHF1O43189 567 aaPredicted RBP7.64□□□□□ -1.19
COL12A1-208ENST00000486533 PITX3O75364 302 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 MRPL33O75394 65 aaKnown RBP7.64□□□□□ -1.19
COL12A1-208ENST00000486533 CNOT4O95628 575 aaKnown RBP7.64□□□□□ -1.19
COL12A1-208ENST00000486533 SMIM6P0DI80 62 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF32P17041 273 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 COX5AP20674 150 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 SNCAP37840 140 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 NPBWR1P48145 328 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 ARHGDIBP52566 201 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 FXYD4P59646 89 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 SNAI3Q3KNW1 292 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 MIDNQ504T8 468 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 TIMM23BQ5SRD1 257 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 PHYHD1Q5SRE7 291 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 FBXW9Q5XUX1 488 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF774Q6NX45 483 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 RNF144BQ7Z419 303 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF695Q8IW36 515 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 MKXQ8IYA7 352 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 CMTM1Q8IZ96 169 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF561Q8N587 486 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 ZIC4Q8N9L1 334 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 DMBX1Q8NFW5 382 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 GTF3AQ92664 365 aaKnown RBP7.64□□□□□ -1.19
COL12A1-208ENST00000486533 HIST1H2AAQ96QV6 131 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 EIF5A2Q9GZV4 153 aaKnown RBP7.64□□□□□ -1.19
COL12A1-208ENST00000486533 TMEM231Q9H6L2 316 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 CRLF2Q9HC73 371 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 UBE2J1Q9Y385 318 aaPredicted RBP7.64□□□□□ -1.19
COL12A1-208ENST00000486533 PLCE1Q9P212 2302 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 HIVEP2P31629 2446 aa7.64□□□□□ -1.19
COL12A1-208ENST00000486533 FN1P02751 2386 aaKnown RBP7.64□□□□□ -1.19
COL12A1-208ENST00000486533 C3orf85A0A1B0GTC6 90 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 DPRXA6NFQ7 191 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF98A6NK75 572 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 OR5H1A6NKK0 313 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 TRDCB7Z8K6 153 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 WRBO00258 174 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 DFFBO76075 338 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 PPYP01298 95 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 SOD3P08294 240 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 RCC1P18754 421 aaPredicted RBP7.63□□□□□ -1.19
COL12A1-208ENST00000486533 NKX2-1P43699 371 aaPredicted RBP7.63□□□□□ -1.19
COL12A1-208ENST00000486533 PPT1P50897 306 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 KRTAP21-3Q3LHN1 58 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF672Q499Z4 452 aaPredicted RBP7.63□□□□□ -1.19
COL12A1-208ENST00000486533 CRIP3Q6Q6R5 217 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 SSX8Q7RTT4 187 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 FBXL14Q8N1E6 418 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 Q8NFD4 153 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 OR10AD1Q8NGE0 317 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 OR5L1Q8NGL2 311 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 LILRB1Q8NHL6 650 aaPredicted RBP7.63□□□□□ -1.19
COL12A1-208ENST00000486533 RXFP4Q8TDU9 374 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 IGFBPL1Q8WX77 278 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 SPSB4Q96A44 273 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 PAPOLGQ9BWT3 736 aaKnown RBP7.63□□□□□ -1.19
COL12A1-208ENST00000486533 EGLN1Q9GZT9 426 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 SLC35B3Q9H1N7 401 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 GPR35Q9HC97 309 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 RPS10P5Q9NQ39 176 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 RCL1Q9Y2P8 373 aaKnown RBP7.63□□□□□ -1.19
COL12A1-208ENST00000486533 FAM96BQ9Y3D0 163 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 ABCA2Q9BZC7 2435 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 A0A1W2PR80 420 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 M0R036 132 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 MPPED1O15442 326 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 KCNAB3O43448 404 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 SPRY1O43609 319 aaPredicted RBP7.63□□□□□ -1.19
COL12A1-208ENST00000486533 ANGPTL7O43827 346 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 LY6G6DO95868 133 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 IFNA17P01571 189 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 DBHP09172 617 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 OR8U9P0C7N5 309 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 PAX1P15863 534 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 ACKR3P25106 362 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 ARR3P36575 388 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 CDKN1AP38936 164 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 ZNF83P51522 516 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 CLINT1Q14677 625 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 RSPO1Q2MKA7 263 aaPredicted RBP7.63□□□□□ -1.19
COL12A1-208ENST00000486533 CEACAM16Q2WEN9 425 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 C9orf135Q5VTT2 229 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 MOB1BQ7L9L4 216 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 MRPL21Q7Z2W9 205 aaKnown RBP7.63□□□□□ -1.19
COL12A1-208ENST00000486533 RTN4RL2Q86UN3 420 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 FAM219AQ8IW50 185 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 OR2C3Q8N628 320 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 OR4D5Q8NGN0 318 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 EDARADDQ8WWZ3 215 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 PIGCQ92535 297 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 MSI2Q96DH6 328 aaKnown RBP7.63□□□□□ -1.19
COL12A1-208ENST00000486533 RBMXL1Q96E39 390 aaKnown RBP7.63□□□□□ -1.19
COL12A1-208ENST00000486533 TMEM56Q96MV1 263 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 C12orf57Q99622 126 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 C1QTNF5Q9BXJ0 243 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 SMIM3Q9BZL3 60 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 TMEM222Q9H0R3 208 aa7.63□□□□□ -1.19
COL12A1-208ENST00000486533 WNT5BQ9H1J7 359 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms