RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 TSSC4Q9Y5U2 329 aaPredicted RBP10.24□□□□□ -0.77
CHMP3-208ENST00000486404 SOCS1O15524 211 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 HSPA12AO43301 675 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 KCNAB3O43448 404 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 LANCL1O43813 399 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 NAPSAO96009 420 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 PF4P02776 101 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 VEGFCP49767 419 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 ZNF134P52741 427 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 SLC35B1P78383 322 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 HLA-DRB3P79483 266 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 LSAMPQ13449 338 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 CHPT1Q8WUD6 406 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 ST6GALNAC6Q969X2 333 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 RASL11BQ9BPW5 248 aa10.23□□□□□ -0.77
CHMP3-208ENST00000486404 TRAV1-2A0A0B4J238 106 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 TRDV1A0A1B0GX56 115 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 DENRO43583 198 aaKnown RBP10.22□□□□□ -0.77
CHMP3-208ENST00000486404 YPEL1O60688 119 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 CD37P11049 281 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 RAB3BP20337 219 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 GADD45AP24522 165 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 CD83Q01151 205 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 EBI3Q14213 229 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 PDLIM3Q53GG5 364 aaPredicted RBP10.22□□□□□ -0.77
CHMP3-208ENST00000486404 UBE2UQ5VVX9 321 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 C22orf42Q6IC83 251 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 OR8H1Q8NGG4 311 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 ARHGAP5-AS1Q96IT6 56 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 YPEL2Q96QA6 119 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 CMSS1Q9BQ75 279 aaKnown RBP10.22□□□□□ -0.77
CHMP3-208ENST00000486404 HDHD3Q9BSH5 251 aaPredicted RBP10.22□□□□□ -0.77
CHMP3-208ENST00000486404 MRPL20Q9BYC9 149 aaKnown RBP10.22□□□□□ -0.77
CHMP3-208ENST00000486404 LIN7CQ9NUP9 197 aaKnown RBP10.22□□□□□ -0.77
CHMP3-208ENST00000486404 HSF4Q9ULV5 492 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 CMYA5Q8N3K9 4069 aa10.22□□□□□ -0.77
CHMP3-208ENST00000486404 SAA2-SAA4A0A096LPE2 208 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 TMEM272A0A1B0GTI8 110 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 ADARB2-AS1A8MUL3 147 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 ZNF736B4DX44 427 aaPredicted RBP10.21□□□□□ -0.77
CHMP3-208ENST00000486404 AP4M1O00189 453 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 ST8SIA5O15466 376 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 RRP9O43818 475 aaKnown RBP10.21□□□□□ -0.77
CHMP3-208ENST00000486404 CD3GP09693 182 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 SAA2P0DJI9 122 aaPredicted RBP10.21□□□□□ -0.77
CHMP3-208ENST00000486404 CD33P20138 364 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 GALP22466 123 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 GPR12P47775 334 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 OR10A3P58181 314 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 MMDQ15546 238 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 C2orf76Q3KRA6 126 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 C10orf99Q6UWK7 81 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 C5orf24Q7Z6I8 188 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 SPARTQ8N0X7 666 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 FAM89BQ8N5H3 189 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 Q8N6K4 173 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 NOL4LQ96MY1 436 aaPredicted RBP10.21□□□□□ -0.77
CHMP3-208ENST00000486404 S1PR3Q99500 378 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 PECRQ9BY49 303 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 YTHDF1Q9BYJ9 559 aaKnown RBP10.21□□□□□ -0.77
CHMP3-208ENST00000486404 SLC23A1Q9UHI7 598 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 RAB22AQ9UL26 194 aa10.21□□□□□ -0.77
CHMP3-208ENST00000486404 A0A075B6Q4 140 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 TRBV6-6A0A0A6YYG2 114 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 IFITM5A6NNB3 132 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 NUDT19A8MXV4 375 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 G3V4G9 280 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 IGHG2P01859 326 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 ZBTB25P24278 435 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 OR3A3P47888 321 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 LY6G6FQ5SQ64 297 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 FAM71F2Q6NXP2 309 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 ZNF880Q6PDB4 577 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 ZNF773Q6PK81 442 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 CD200R1LQ6Q8B3 271 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 ZNF833PQ6ZTB9 187 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 ZNF329Q86UD4 541 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 STPG2Q8N412 459 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 COMMD1Q8N668 190 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 EDARADDQ8WWZ3 215 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 RAB3CQ96E17 227 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 ZNF251Q9BRH9 671 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 GON7Q9BXV9 100 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 IFI27L2Q9H2X8 130 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 PIPOXQ9P0Z9 390 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 LINC00527Q9UJ94 153 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 STUB1Q9UNE7 303 aa10.2□□□□□ -0.78
CHMP3-208ENST00000486404 RRP15Q9Y3B9 282 aaKnown RBP10.2□□□□□ -0.78
CHMP3-208ENST00000486404 SMIM30A4D0T7 59 aa10.19□□□□□ -0.78
CHMP3-208ENST00000486404 METTL21EPA6NDL7 271 aa10.19□□□□□ -0.78
CHMP3-208ENST00000486404 FOXI3A8MTJ6 420 aaPredicted RBP10.19□□□□□ -0.78
CHMP3-208ENST00000486404 RAB29O14966 203 aa10.19□□□□□ -0.78
CHMP3-208ENST00000486404 SLC2A2P11168 524 aaPredicted RBP10.19□□□□□ -0.78
CHMP3-208ENST00000486404 VDAC1P21796 283 aa10.19□□□□□ -0.78
CHMP3-208ENST00000486404 SOX6P35712 828 aa10.19□□□□□ -0.78
CHMP3-208ENST00000486404 TCTEX1D4Q5JR98 221 aa10.19□□□□□ -0.78
CHMP3-208ENST00000486404 Q6ZPA2 131 aa10.19□□□□□ -0.78
CHMP3-208ENST00000486404 Q8N9W7 124 aa10.19□□□□□ -0.78
CHMP3-208ENST00000486404 ABCG5Q9H222 651 aa10.19□□□□□ -0.78
CHMP3-208ENST00000486404 Q9N2K0 584 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms