RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 OR2AK2Q8NG84 335 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 ARHGAP5-AS1Q96IT6 56 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 RASL11BQ9BPW5 248 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 STEAP1Q9UHE8 339 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 LRRC42Q9Y546 428 aa13.98□□□□□ -0.17
COL6A1-204ENST00000486023 SMIM30A4D0T7 59 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 ST8SIA5O15466 376 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 TXNL1O43396 289 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 YPEL1O60688 119 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 CD33P20138 364 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 PSMD7P51665 324 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 F2RL1P55085 397 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 HTD2P86397 168 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 EBI3Q14213 229 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 HMGN3Q15651 99 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 STEAP3Q658P3 488 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 C22orf42Q6IC83 251 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 ZNF554Q86TJ5 538 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 FOXRED2Q8IWF2 684 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 IZUMO1Q8IYV9 350 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 SVOPQ8N4V2 548 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 YPEL2Q96QA6 119 aa13.97□□□□□ -0.17
COL6A1-204ENST00000486023 A0A075B6Q4 140 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 TMEM272A0A1B0GTI8 110 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 HSPA12AO43301 675 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 NAPSAO96009 420 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 SLC2A2P11168 524 aaPredicted RBP13.96□□□□□ -0.17
COL6A1-204ENST00000486023 TMEM50BP56557 158 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 GABARAPL2P60520 117 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 SPARTQ8N0X7 666 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 FAM89BQ8N5H3 189 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 Q8N9W7 124 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 CHPT1Q8WUD6 406 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 S1PR3Q99500 378 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 CMSS1Q9BQ75 279 aaKnown RBP13.96□□□□□ -0.17
COL6A1-204ENST00000486023 PECRQ9BY49 303 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 MRPL20Q9BYC9 149 aaKnown RBP13.96□□□□□ -0.17
COL6A1-204ENST00000486023 NDUFB11Q9NX14 153 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 SLC23A1Q9UHI7 598 aa13.96□□□□□ -0.17
COL6A1-204ENST00000486023 A0A0B4J203 849 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 LANCL1O43813 399 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 CEACAM6P40199 344 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 ZNF137PP52743 207 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 SLC35B1P78383 322 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 MRPS15P82914 257 aaKnown RBP13.95□□□□□ -0.18
COL6A1-204ENST00000486023 Q6ZPA2 131 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 ODF3L1Q8IXM7 274 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 Q8N6K4 173 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 OR56B1Q8NGI3 324 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 RITA1Q96K30 269 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 ABCG5Q9H222 651 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 RIMS4Q9H426 269 aaPredicted RBP13.95□□□□□ -0.18
COL6A1-204ENST00000486023 PLSCR3Q9NRY6 295 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 RAB22AQ9UL26 194 aa13.95□□□□□ -0.18
COL6A1-204ENST00000486023 SAA2-SAA4A0A096LPE2 208 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 TRDV1A0A1B0GX56 115 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 SHISA3A0PJX4 238 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 NUDT19A8MXV4 375 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 IGHG2P01859 326 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 SCTP09683 121 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 SAA2P0DJI9 122 aaPredicted RBP13.94□□□□□ -0.18
COL6A1-204ENST00000486023 IGLL1P15814 213 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 RAB3BP20337 219 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 GPR12P47775 334 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 LSAMPQ13449 338 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 MMDQ15546 238 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 PLAC9Q5JTB6 97 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 SAMD5Q5TGI4 173 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 STPG2Q8N412 459 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 ABHD14BQ96IU4 210 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 NABP2Q9BQ15 211 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 PARP12Q9H0J9 701 aaKnown RBP13.94□□□□□ -0.18
COL6A1-204ENST00000486023 LIN7CQ9NUP9 197 aaKnown RBP13.94□□□□□ -0.18
COL6A1-204ENST00000486023 OR1A1Q9P1Q5 309 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 RNF150Q9ULK6 438 aa13.94□□□□□ -0.18
COL6A1-204ENST00000486023 TRAV1-2A0A0B4J238 106 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 CNTFRP26992 372 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 SOX6P35712 828 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 RANBP1P43487 201 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 HLA-DRB3P79483 266 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 BEAN1Q3B7T3 259 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 MOGAT2Q3SYC2 334 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 RPL39P5Q59GN2 51 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 ZNF880Q6PDB4 577 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 GLDNQ6ZMI3 551 aaPredicted RBP13.93□□□□□ -0.18
COL6A1-204ENST00000486023 C18orf65Q6ZTR6 163 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 MOB1BQ7L9L4 216 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 RAB3CQ96E17 227 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 HSPB9Q9BQS6 159 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 ZNF251Q9BRH9 671 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 C12orf4Q9NQ89 552 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 HSF4Q9ULV5 492 aa13.93□□□□□ -0.18
COL6A1-204ENST00000486023 TGP01266 2768 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 IFITM5A6NNB3 132 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 FOXI3A8MTJ6 420 aaPredicted RBP13.92□□□□□ -0.18
COL6A1-204ENST00000486023 AP4M1O00189 453 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 MRPS14O60783 128 aaKnown RBP13.92□□□□□ -0.18
COL6A1-204ENST00000486023 CD3GP09693 182 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 GNB3P16520 340 aa13.92□□□□□ -0.18
COL6A1-204ENST00000486023 ZBTB25P24278 435 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms