RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 DEGS1O15121 323 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 SLC31A2O15432 143 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 SPRY2O43597 315 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 CDK2AP2O75956 126 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 KDM4BO94953 1096 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 NDUFA3O95167 84 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 TRGV3P03979 118 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 SLC2A5P22732 501 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 ALDH3A2P51648 485 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 ATP1B3P54709 279 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 TCTAP57738 103 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 CX3CL1P78423 397 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 PDZK1IP1Q13113 114 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 CDK5R1Q15078 307 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 ZIK1Q3SY52 487 aaPredicted RBP4.87□□□□□ -1.63
SMC4-217ENST00000485867 MOGAT2Q3SYC2 334 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 ACTBL2Q562R1 376 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 PAN3Q58A45 887 aaKnown RBP4.87□□□□□ -1.63
SMC4-217ENST00000485867 RNASE12Q5GAN4 147 aaKnown RBP4.87□□□□□ -1.63
SMC4-217ENST00000485867 RSBN1Q5VWQ0 802 aaPredicted RBP4.87□□□□□ -1.63
SMC4-217ENST00000485867 ZNF660Q6AZW8 331 aaPredicted RBP4.87□□□□□ -1.63
SMC4-217ENST00000485867 LIN54Q6MZP7 749 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 SLC25A48Q6ZT89 311 aaKnown RBP4.87□□□□□ -1.63
SMC4-217ENST00000485867 NANOGP1Q8N7R0 232 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 AQP11Q8NBQ7 271 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 DNAAF1Q8NEP3 725 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 BBS1Q8NFJ9 593 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 OR52M1Q8NGK5 317 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 PLPPR1Q8TBJ4 325 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 TSEN15Q8WW01 171 aaKnown RBP4.87□□□□□ -1.63
SMC4-217ENST00000485867 KCTD14Q9BQ13 255 aaPredicted RBP4.87□□□□□ -1.63
SMC4-217ENST00000485867 ZNF251Q9BRH9 671 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 SLA2Q9H6Q3 261 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 IKZF2Q9UKS7 526 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 R4GMQ9 66 aa4.87□□□□□ -1.63
SMC4-217ENST00000485867 AGRNO00468 2067 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 IGHV3-43A0A0B4J1X8 118 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 TRAV24A0A0B4J272 114 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 H0YJX3 145 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 C15orf65H3BRN8 121 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 SDCBPO00560 298 aaPredicted RBP4.86□□□□□ -1.63
SMC4-217ENST00000485867 MAGEB4O15481 346 aaPredicted RBP4.86□□□□□ -1.63
SMC4-217ENST00000485867 LANCL1O43813 399 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 OR2A4O95047 310 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 TRBV12-3P01733 135 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 FABP3P05413 133 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 MRPL3P09001 348 aaKnown RBP4.86□□□□□ -1.63
SMC4-217ENST00000485867 IGHV3-43DP0DP04 118 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 UCP3P55916 312 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 MTCP1P56278 107 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 LINC00205P59089 165 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 PAX5Q02548 391 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 TMEM267Q0VDI3 215 aaPredicted RBP4.86□□□□□ -1.63
SMC4-217ENST00000485867 GUCA2BQ16661 112 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 ODF4Q2M2E3 257 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 DEFB135Q30KP9 77 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 SLC35D3Q5M8T2 416 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 GLYATQ6IB77 296 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 C8orf82Q6P1X6 216 aaPredicted RBP4.86□□□□□ -1.63
SMC4-217ENST00000485867 UNQ5815/PRO19632Q6UWF5 114 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 PLEKHG7Q6ZR37 379 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 TMEM179BQ7Z7N9 219 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 PPP1R27Q86WC6 154 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 CPOQ8IVL8 374 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 NRACQ8N912 160 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 ZNF439Q8NDP4 499 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 NPBQ8NG41 125 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 UBALD1Q8TB05 177 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 TEX47Q8TBZ9 253 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 ABHD5Q8WTS1 349 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 ASB17Q8WXJ9 295 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 RFT1Q96AA3 541 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 PYURFQ96I23 114 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 APOL4Q9BPW4 351 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 DGCR6LQ9BY27 220 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 BARHL1Q9BZE3 327 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 ZC4H2Q9NQZ6 224 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 SAR1AQ9NR31 198 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 MRGBPQ9NV56 204 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 APLNQ9ULZ1 77 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 GAB2Q9UQC2 676 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 SNX5Q9Y5X3 404 aa4.86□□□□□ -1.63
SMC4-217ENST00000485867 C13orf42A0A1B0GVH6 325 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 TNFRSF11BO00300 401 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 MAGEB3O15480 346 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 SYT7O43581 403 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 MITFO75030 526 aaPredicted RBP4.85□□□□□ -1.63
SMC4-217ENST00000485867 KRT36O76013 467 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 CCNB2O95067 398 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 SERPINA3P01011 423 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 CSTBP04080 98 aaKnown RBP4.85□□□□□ -1.63
SMC4-217ENST00000485867 CD40LGP29965 261 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 KIR2DS2P43631 304 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 NANOS2P60321 138 aaKnown RBP4.85□□□□□ -1.63
SMC4-217ENST00000485867 RBMS2Q15434 407 aaKnown RBP4.85□□□□□ -1.63
SMC4-217ENST00000485867 TATDN3Q17R31 274 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 RPEL1Q2QD12 228 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 DEFB114Q30KQ6 69 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 Q3ZCU0 254 aa4.85□□□□□ -1.63
SMC4-217ENST00000485867 AKIRIN2Q53H80 203 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms