RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 OR52A5Q9H2C5 316 aa0.59□□□□□ -2.31
VPS50-216ENST00000484954 OR51B6Q9H340 312 aa0.59□□□□□ -2.31
VPS50-216ENST00000484954 MS4A12Q9NXJ0 267 aa0.59□□□□□ -2.31
VPS50-216ENST00000484954 TMEM216Q9P0N5 145 aa0.59□□□□□ -2.31
VPS50-216ENST00000484954 LINC00527Q9UJ94 153 aa0.59□□□□□ -2.31
VPS50-216ENST00000484954 FBXL3Q9UKT7 428 aa0.59□□□□□ -2.31
VPS50-216ENST00000484954 STK38LQ9Y2H1 464 aa0.59□□□□□ -2.31
VPS50-216ENST00000484954 A0A1W2PQL4 384 aaPredicted RBP0.58□□□□□ -2.32
VPS50-216ENST00000484954 EFCAB9A8MZ26 197 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 B4DEV8 164 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 F5H5K5 113 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 SULT1C2O00338 296 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 TOR1AO14656 332 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 PHYHO14832 338 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 YKT6O15498 198 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 CYTH3O43739 400 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 UGT2B11O75310 529 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 ADAP1O75689 374 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 LY6HO94772 140 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 SNAP29O95721 258 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 IGLV3-27P01718 113 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 FBP1P09467 338 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 LYNX1P0DP58 116 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 CPMP14384 443 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 CDK2P24941 298 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 PSMA1P25786 263 aaKnown RBP0.58□□□□□ -2.32
VPS50-216ENST00000484954 KDELR2P33947 212 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 GABRA3P34903 492 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 ACTR1BP42025 376 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 LPAR6P43657 344 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 OR1E2P47887 323 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 STC1P52823 247 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 RAB8AP61006 207 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 XRCC4Q13426 336 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 C4orf26Q17RF5 130 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 LRRC26Q2I0M4 334 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 TRMT12Q53H54 448 aaKnown RBP0.58□□□□□ -2.32
VPS50-216ENST00000484954 SPATA31B1PQ5VZV4 182 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 Q6ZRN7 208 aaPredicted RBP0.58□□□□□ -2.32
VPS50-216ENST00000484954 PLCZ1Q86YW0 608 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 BLIDQ8IZY5 108 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 RIBC1Q8N443 379 aaPredicted RBP0.58□□□□□ -2.32
VPS50-216ENST00000484954 C17orf78Q8N4C9 275 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 SPERTQ8NA61 448 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 OR5K1Q8NHB7 308 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 C16orf78Q8WTQ4 265 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 TNFAIP8L1Q8WVP5 186 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 TAMM41Q96BW9 452 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 CAPZA3Q96KX2 299 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 EBNA1BP2Q99848 306 aaKnown RBP0.58□□□□□ -2.32
VPS50-216ENST00000484954 TREM1Q9NP99 234 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 PRO2289Q9P1D8 64 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 CLUHO75153 1309 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 USP42Q9H9J4 1324 aaKnown RBP0.58□□□□□ -2.32
VPS50-216ENST00000484954 AK9Q5TCS8 1911 aa0.58□□□□□ -2.32
VPS50-216ENST00000484954 KIAA0232Q92628 1395 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 TRPM6Q9BX84 2022 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 IGHV3-15A0A0B4J1V0 119 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 MDFIC2A0A1B0GVS7 189 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 DHRS12A0PJE2 317 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 VPS37CA5D8V6 355 aaPredicted RBP0.57□□□□□ -2.32
VPS50-216ENST00000484954 FAM25EA8MYX2 175 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 C9J4A7 227 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 FNDC10F2Z333 226 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 K7EQS6 105 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 NDUFS6O75380 124 aaKnown RBP0.57□□□□□ -2.32
VPS50-216ENST00000484954 OR4A8P0C604 315 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 CCL3P10147 92 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 NQO1P15559 274 aaKnown RBP0.57□□□□□ -2.32
VPS50-216ENST00000484954 ATF1P18846 271 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 CRYBB3P26998 211 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 OPRM1P35372 400 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 SULT1A2P50226 295 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 DLX6P56179 175 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 RWDD2BP57060 319 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 ACTBP60709 375 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 ACTG1P63261 375 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 MAPK14Q16539 360 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 RASL11AQ6T310 242 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 NAA40Q86UY6 237 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 ZBTB8OSQ8IWT0 167 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 BOD1L2Q8IYS8 172 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 TCAIMQ8N3R3 496 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 OR11H1Q8NG94 326 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 OR5L1Q8NGL2 311 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 ZNF563Q8TA94 476 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 ACY3Q96HD9 319 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 ABHD14BQ96IU4 210 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 Q9BRP9 147 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 PECRQ9BY49 303 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 UGT2B28Q9BY64 529 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 ASCL3Q9NQ33 180 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 UBQLN4Q9NRR5 601 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 TXNL4BQ9NX01 149 aaKnown RBP0.57□□□□□ -2.32
VPS50-216ENST00000484954 SLIT2O94813 1529 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 MYO15BQ96JP2 1530 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 YLPM1P49750 1951 aaKnown RBP0.57□□□□□ -2.32
VPS50-216ENST00000484954 PTPRJQ12913 1337 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 ADAMTSL1Q8N6G6 1762 aa0.57□□□□□ -2.32
VPS50-216ENST00000484954 IQCF5A8MTL0 148 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms