RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 CLUHO75153 1309 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 RIMS2Q9UQ26 1411 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 ERICH2A1L162 156 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 IGSF23A1L1A6 192 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 ODF3BA8MYP8 253 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 C9J4A7 227 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 HSBP1L1C9JCN9 74 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 J3QLI3 93 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 K7EQS6 105 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 TRAPPC3O43617 180 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 GP1BAP07359 652 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 CPMP14384 443 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 NQO1P15559 274 aaKnown RBP0.64□□□□□ -2.31
SCAF11-207ENST00000484275 ATP6V0CP27449 155 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 BLVRBP30043 206 aaPredicted RBP0.64□□□□□ -2.31
SCAF11-207ENST00000484275 STC1P52823 247 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 GABARAPL2P60520 117 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 RAB8AP61006 207 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 SLC35A2P78381 396 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 ZNF117Q03924 483 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 PRB3Q04118 309 aaPredicted RBP0.64□□□□□ -2.31
SCAF11-207ENST00000484275 TMED1Q13445 227 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 ANGPT1Q15389 498 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 MAPK14Q16539 360 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 TIMM23BQ5SRD1 257 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 HES3Q5TGS1 186 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 EBLN2Q6P2I7 272 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 CCDC121Q6ZUS5 278 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 SPATA24Q86W54 205 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 C2orf73Q8N5S3 287 aaPredicted RBP0.64□□□□□ -2.31
SCAF11-207ENST00000484275 NATD1Q8N6N6 113 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 OR11L1Q8NGX0 322 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 OR51H1Q8NH63 302 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 ANGPTL6Q8NI99 470 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 ERMNQ8TAM6 284 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 TMBIM1Q969X1 311 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 LRRC45Q96CN5 670 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 DNAJC30Q96LL9 226 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 UPK3BQ9BT76 320 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 MED18Q9BUE0 208 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 C1QTNF6Q9BXI9 259 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 CHST5Q9GZS9 411 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 AICDAQ9GZX7 198 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 SMDT1Q9H4I9 107 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 TREM1Q9NP99 234 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 ASCL3Q9NQ33 180 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 SCML1Q9UN30 329 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 PSMD13Q9UNM6 376 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 HEY1Q9Y5J3 304 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 ALG5Q9Y673 324 aa0.64□□□□□ -2.31
SCAF11-207ENST00000484275 A0A0J9YX75 114 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 LOC102725191A0A1B0GVB3 256 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 A0A1W2PQL4 384 aaPredicted RBP0.63□□□□□ -2.31
SCAF11-207ENST00000484275 DHRS12A0PJE2 317 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 TMEM213A2RRL7 107 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 LINC00862A6NCI5 91 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 ERICH4A6NGS2 130 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 KNCNA6PVL3 124 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 IQCF5A8MTL0 148 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 MKRN2OSH3BPM6 223 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 UBFD1O14562 309 aaKnown RBP0.63□□□□□ -2.31
SCAF11-207ENST00000484275 SCN2BO60939 215 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 CDK14O94921 469 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 BRI3O95415 125 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 CRYGDP07320 174 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 CD7P09564 240 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 IGHV3-30-3P0DP02 117 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 ZNF7P17097 686 aaPredicted RBP0.63□□□□□ -2.31
SCAF11-207ENST00000484275 PVALBP20472 110 aaPredicted RBP0.63□□□□□ -2.31
SCAF11-207ENST00000484275 CFL1P23528 166 aaKnown RBP0.63□□□□□ -2.31
SCAF11-207ENST00000484275 OPRM1P35372 400 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 GABRA4P48169 554 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 SULT1A2P50226 295 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 DLX6P56179 175 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 RWDD2BP57060 319 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 DYNLL1P63167 89 aaKnown RBP0.63□□□□□ -2.31
SCAF11-207ENST00000484275 BSPH1Q075Z2 132 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 SLAMF1Q13291 335 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 HTR4Q13639 388 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 CLEC12BQ2HXU8 276 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 MRPL51Q4U2R6 128 aaKnown RBP0.63□□□□□ -2.31
SCAF11-207ENST00000484275 TRMT12Q53H54 448 aaKnown RBP0.63□□□□□ -2.31
SCAF11-207ENST00000484275 CENPWQ5EE01 88 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 CRLF3Q8IUI8 442 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 SYCE1Q8N0S2 351 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 ATP6V1C2Q8NEY4 427 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 OR52E4Q8NGH9 312 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 OR10A6Q8NH74 314 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 ZNRF2Q8NHG8 242 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 SUN5Q8TC36 379 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 SMIM12Q96EX1 92 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 MBOAT7Q96N66 472 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 ACBD6Q9BR61 282 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 MED10Q9BTT4 135 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 CHMP4BQ9H444 224 aaKnown RBP0.63□□□□□ -2.31
SCAF11-207ENST00000484275 C1orf109Q9NX04 203 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 LINC00527Q9UJ94 153 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 DNAJC12Q9UKB3 198 aa0.63□□□□□ -2.31
SCAF11-207ENST00000484275 MRPS16Q9Y3D3 137 aaKnown RBP0.63□□□□□ -2.31
SCAF11-207ENST00000484275 OR51B4Q9Y5P0 310 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms