RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ARPC1AQ92747 370 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 GGHQ92820 318 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 DLX4Q92988 240 aaPredicted RBP10.77□□□□□ -0.69
VARS-226ENST00000483275 FAM46BQ96A09 425 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 SMIM19Q96E16 107 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 UBE2E2Q96LR5 201 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 ABHD14AQ9BUJ0 271 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 SELENOIQ9C0D9 397 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 OR51J1Q9H342 316 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 TAF9BQ9HBM6 251 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 OR2S2Q9NQN1 319 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 PAK1IP1Q9NWT1 392 aaPredicted RBP10.77□□□□□ -0.69
VARS-226ENST00000483275 SCN3BQ9NY72 215 aa10.77□□□□□ -0.69
VARS-226ENST00000483275 CNOT2Q9NZN8 540 aaKnown RBP10.77□□□□□ -0.69
VARS-226ENST00000483275 STARD9Q9P2P6 4700 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 IGHV4OR15-8A0A075B7B6 117 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 A0A087WW49 117 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 OVOL1O14753 267 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 MYL12BO14950 172 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 NBR2O15453 112 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 LANCL1O43813 399 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 SOX15O60248 233 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 IGLV1-40P01703 118 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 OR5H8P0DN80 308 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 HSPA13P48723 471 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 ST3GAL4Q11206 333 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 SRSF7Q16629 238 aaKnown RBP eCLIP10.76□□□□□ -0.69
VARS-226ENST00000483275 CCDC58Q4VC31 144 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 C6orf183Q5T699 404 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 FAM27D1Q5T7N8 215 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 SIGIRRQ6IA17 410 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 NRG4Q8WWG1 115 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 GHSRQ92847 366 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 OR14A2Q96R54 314 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 ZNF251Q9BRH9 671 aa10.76□□□□□ -0.69
VARS-226ENST00000483275 DNAH1Q9P2D7 4330 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 SAA2-SAA4A0A096LPE2 208 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 TRBV5-5A0A0J9YX44 114 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 A0A1W2PN81 502 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 CRTAPO75718 401 aaPredicted RBP10.75□□□□□ -0.69
VARS-226ENST00000483275 IGHV3-11P01762 117 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 HLA-DRB1P01911 266 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 MAS1P04201 325 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 SAA2P0DJI9 122 aaPredicted RBP10.75□□□□□ -0.69
VARS-226ENST00000483275 MGMTP16455 207 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 CHRNA7P36544 502 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 RAB9AP51151 201 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 RPS11P62280 158 aaKnown RBP eCLIP10.75□□□□□ -0.69
VARS-226ENST00000483275 DOC2BQ14184 412 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 C5orf64Q2M2E5 130 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 Q3ZCU0 254 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 MORN2Q502X0 79 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 AWAT2Q6E213 333 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 FAM131AQ6UXB0 335 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 AHSA2Q719I0 299 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 MRPL30Q8TCC3 161 aaKnown RBP10.75□□□□□ -0.69
VARS-226ENST00000483275 NABP2Q9BQ15 211 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 PLCXD1Q9NUJ7 323 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 BABAM2Q9NXR7 383 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 ZNF580Q9UK33 172 aa10.75□□□□□ -0.69
VARS-226ENST00000483275 FAM90A10PA6NDY2 464 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 OGG1O15527 345 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 ZNF780AO75290 641 aaPredicted RBP10.74□□□□□ -0.69
VARS-226ENST00000483275 ATP6V1G2O95670 118 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 LYL1P12980 280 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 GP9P14770 177 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 TAS2R43P59537 309 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 RUNX1Q01196 453 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 IZUMO2Q6UXV1 221 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 GLDNQ6ZMI3 551 aaPredicted RBP10.74□□□□□ -0.69
VARS-226ENST00000483275 GAPTQ8N292 157 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 ABHD5Q8WTS1 349 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 FBLIM1Q8WUP2 373 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 Q96M66 194 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 PARP12Q9H0J9 701 aaKnown RBP10.74□□□□□ -0.69
VARS-226ENST00000483275 KCNK15Q9H427 330 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 FBXL15Q9H469 300 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 SPACA1Q9HBV2 294 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 PALMDQ9NP74 551 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 CKLFQ9UBR5 152 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 PSORS1C1Q9UIG5 152 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 GAB2Q9UQC2 676 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 ERGIC3Q9Y282 383 aa10.74□□□□□ -0.69
VARS-226ENST00000483275 TNCP24821 2201 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 ST8SIA5O15466 376 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 FSTP19883 344 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 INSL3P51460 131 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 TMEM30BQ3MIR4 351 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 Q499Y3 187 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 RPL39P5Q59GN2 51 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 C19orf54Q5BKX5 351 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 C6orf141Q5SZD1 244 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 DMKNQ6E0U4 476 aaPredicted RBP10.73□□□□□ -0.69
VARS-226ENST00000483275 ZNF429Q86V71 674 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 MINDY2Q8NBR6 621 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 PGLYRP3Q96LB9 341 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 MS4A10Q96PG2 267 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 FAM103A1Q9BTL3 118 aaKnown RBP10.73□□□□□ -0.69
VARS-226ENST00000483275 TOLLIPQ9H0E2 274 aa10.73□□□□□ -0.69
VARS-226ENST00000483275 MBNL3Q9NUK0 354 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms