RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 ABHD14AQ9BUJ0 271 aa13.33□□□□□ -0.28
HMGN1-214ENST00000482733 A0A1W2PPI3 338 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 ITGB1BP1O14713 200 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 TIMM23O14925 209 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 SLC31A2O15432 143 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 CHST1O43916 411 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 FCGR3AP08637 254 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 ZBTB25P24278 435 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 ZNF134P52741 427 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 PITPNAQ00169 270 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 GNMTQ14749 295 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 PNLIPRP3Q17RR3 467 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 GPR107Q5VW38 600 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 HACD4Q5VWC8 232 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 CCBE1Q6UXH8 406 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-214ENST00000482733 C5orf24Q7Z6I8 188 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 TMEM219Q86XT9 240 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 OR2AK2Q8NG84 335 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 OR4A4PQ8NGN8 299 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 LINC01006Q8NI28 216 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 CAPSLQ8WWF8 208 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 ST6GALNAC6Q969X2 333 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 ZNF747Q9BV97 191 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 DIABLOQ9NR28 239 aa13.32□□□□□ -0.28
HMGN1-214ENST00000482733 IGHV1-3A0A0C4DH29 117 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 FAM90A9PA6NNJ1 464 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 HSPA12AO43301 675 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 DIRAS3O95661 229 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 SCTP09683 121 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 DTYMKP23919 212 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 DIAPH2-AS1Q14236 149 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 HABP2Q14520 560 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-214ENST00000482733 CTF1Q16619 201 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 Q6ZS49 121 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 TGIF2LXQ8IUE1 241 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 LYG1Q8N1E2 194 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 DRAM1Q8N682 238 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 RTN4IP1Q8WWV3 396 aaPredicted RBP13.31□□□□□ -0.28
HMGN1-214ENST00000482733 EDARADDQ8WWZ3 215 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 SLC25A38Q96DW6 304 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 GHITMQ9H3K2 345 aa13.31□□□□□ -0.28
HMGN1-214ENST00000482733 FABP7O15540 132 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 LANCL1O43813 399 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 OR2F2O95006 317 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 CEACAM6P40199 344 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 RPL5P46777 297 aaKnown RBP13.3□□□□□ -0.28
HMGN1-214ENST00000482733 RORCP51449 518 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 GNG2P59768 71 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 ZNF260Q3ZCT1 412 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 UBE2NLQ5JXB2 153 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 C11orf88Q6PI97 169 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 MOB3BQ86TA1 216 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 OR56B4Q8NH76 319 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 ACOT12Q8WYK0 555 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 CFHR4Q92496 578 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 S100A16Q96FQ6 103 aaKnown RBP13.3□□□□□ -0.28
HMGN1-214ENST00000482733 RBM14Q96PK6 669 aaKnown RBP13.3□□□□□ -0.28
HMGN1-214ENST00000482733 NAA50Q9GZZ1 169 aaKnown RBP13.3□□□□□ -0.28
HMGN1-214ENST00000482733 ABCG5Q9H222 651 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 DCSTAMPQ9H295 470 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 PIPOXQ9P0Z9 390 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 SLC23A1Q9UHI7 598 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 RNF114Q9Y508 228 aa13.3□□□□□ -0.28
HMGN1-214ENST00000482733 TMEM235A6NFC5 223 aa13.29□□□□□ -0.28
HMGN1-214ENST00000482733 M0QZK8 103 aa13.29□□□□□ -0.28
HMGN1-214ENST00000482733 CD24P25063 80 aa13.29□□□□□ -0.28
HMGN1-214ENST00000482733 REG1BP48304 166 aa13.29□□□□□ -0.28
HMGN1-214ENST00000482733 FAM71F2Q6NXP2 309 aa13.29□□□□□ -0.28
HMGN1-214ENST00000482733 SHISA2Q6UWI4 295 aa13.29□□□□□ -0.28
HMGN1-214ENST00000482733 OR2T6Q8NHC8 308 aa13.29□□□□□ -0.28
HMGN1-214ENST00000482733 CMTM3Q96MX0 182 aa13.29□□□□□ -0.28
HMGN1-214ENST00000482733 SLC25A33Q9BSK2 321 aa13.29□□□□□ -0.28
HMGN1-214ENST00000482733 CABLES2Q9BTV7 478 aa13.29□□□□□ -0.28
HMGN1-214ENST00000482733 PRSS22Q9GZN4 317 aa13.29□□□□□ -0.28
HMGN1-214ENST00000482733 TRAV18A0A075B6X5 111 aa13.28□□□□□ -0.28
HMGN1-214ENST00000482733 SNRNP70P08621 437 aaKnown RBP13.28□□□□□ -0.28
HMGN1-214ENST00000482733 CD1BP29016 333 aa13.28□□□□□ -0.28
HMGN1-214ENST00000482733 HES1Q14469 280 aa13.28□□□□□ -0.28
HMGN1-214ENST00000482733 IZUMO1Q8IYV9 350 aa13.28□□□□□ -0.28
HMGN1-214ENST00000482733 SAMD12Q8N8I0 201 aa13.28□□□□□ -0.28
HMGN1-214ENST00000482733 AP3S1Q92572 193 aa13.28□□□□□ -0.28
HMGN1-214ENST00000482733 BCL7BQ9BQE9 202 aa13.28□□□□□ -0.28
HMGN1-214ENST00000482733 TOLLIPQ9H0E2 274 aa13.28□□□□□ -0.28
HMGN1-214ENST00000482733 IFI27L2Q9H2X8 130 aa13.28□□□□□ -0.28
HMGN1-214ENST00000482733 OR1A1Q9P1Q5 309 aa13.28□□□□□ -0.28
HMGN1-214ENST00000482733 ZNF230Q9UIE0 474 aaPredicted RBP13.28□□□□□ -0.28
HMGN1-214ENST00000482733 SCOCQ9UIL1 159 aa13.28□□□□□ -0.28
HMGN1-214ENST00000482733 IGKV1-6A0A0C4DH72 117 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 HAX1O00165 279 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 RAB29O14966 203 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 XRCC3O43542 346 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 IGKV1D-33P01593 117 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 IGKV1-33P01594 117 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 CTXN2P0C2S0 81 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 GSTT2P0CG29 244 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 GSTT2BP0CG30 244 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 TMEM11P17152 192 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 PROK1P58294 105 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 EBI3Q14213 229 aa13.27□□□□□ -0.29
HMGN1-214ENST00000482733 ZNF833PQ6ZTB9 187 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms