RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 KIR2DS1Q14954 304 aa16.8■□□□□ 0.28
SEC13-217ENST00000482647 CCBE1Q6UXH8 406 aaPredicted RBP16.8■□□□□ 0.28
SEC13-217ENST00000482647 TMEM219Q86XT9 240 aa16.8■□□□□ 0.28
SEC13-217ENST00000482647 OR2AK2Q8NG84 335 aa16.8■□□□□ 0.28
SEC13-217ENST00000482647 ABHD14AQ9BUJ0 271 aa16.8■□□□□ 0.28
SEC13-217ENST00000482647 NPFFR1Q9GZQ6 430 aa16.8■□□□□ 0.28
SEC13-217ENST00000482647 MMP24Q9Y5R2 645 aa16.8■□□□□ 0.28
SEC13-217ENST00000482647 TIMM23O14925 209 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 HSPA12AO43301 675 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 CHST1O43916 411 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 TSPAN9O75954 239 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 CD24P25063 80 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 CEACAM6P40199 344 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 RORCP51449 518 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 SRSF7Q16629 238 aaKnown RBP eCLIP16.79■□□□□ 0.28
SEC13-217ENST00000482647 PNLIPRP3Q17RR3 467 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 Q6ZSV7 163 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 LYG1Q8N1E2 194 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 DRAM1Q8N682 238 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 DTX3Q8N9I9 347 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 OR4A4PQ8NGN8 299 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 OR4C13Q8NGP0 309 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 CAPSLQ8WWF8 208 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 ST6GALNAC6Q969X2 333 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 S100A16Q96FQ6 103 aaKnown RBP16.79■□□□□ 0.28
SEC13-217ENST00000482647 ABCG5Q9H222 651 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 SLC23A1Q9UHI7 598 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 ELF5Q9UKW6 265 aaPredicted RBP16.79■□□□□ 0.28
SEC13-217ENST00000482647 ANK2Q01484 3957 aa16.79■□□□□ 0.28
SEC13-217ENST00000482647 TRAV18A0A075B6X5 111 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 A0A1W2PPI3 338 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 CLPSL1A2RUU4 121 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 FABP7O15540 132 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 DTYMKP23919 212 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 REG1BP48304 166 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 ZNF137PP52743 207 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 GNG2P59768 71 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 ZNF260Q3ZCT1 412 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 UBE2NLQ5JXB2 153 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 MOB3BQ86TA1 216 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 THNSL2Q86YJ6 484 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 SAMD12Q8N8I0 201 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 OR56B4Q8NH76 319 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 RTN4IP1Q8WWV3 396 aaPredicted RBP16.78■□□□□ 0.28
SEC13-217ENST00000482647 DCSTAMPQ9H295 470 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 C16orf95Q9H693 158 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 ZNF230Q9UIE0 474 aaPredicted RBP16.78■□□□□ 0.28
SEC13-217ENST00000482647 SCOCQ9UIL1 159 aa16.78■□□□□ 0.28
SEC13-217ENST00000482647 IGHV1-3A0A0C4DH29 117 aa16.77■□□□□ 0.28
SEC13-217ENST00000482647 TMEM235A6NFC5 223 aa16.77■□□□□ 0.28
SEC13-217ENST00000482647 TXNL1O43396 289 aa16.77■□□□□ 0.28
SEC13-217ENST00000482647 Q6ZS49 121 aa16.77■□□□□ 0.28
SEC13-217ENST00000482647 C16orf82Q7Z2V1 217 aa16.77■□□□□ 0.28
SEC13-217ENST00000482647 TGIF2LXQ8IUE1 241 aa16.77■□□□□ 0.28
SEC13-217ENST00000482647 CLVS1Q8IUQ0 354 aaPredicted RBP16.77■□□□□ 0.28
SEC13-217ENST00000482647 LINC01006Q8NI28 216 aa16.77■□□□□ 0.28
SEC13-217ENST00000482647 ACOT12Q8WYK0 555 aa16.77■□□□□ 0.28
SEC13-217ENST00000482647 AKR1E2Q96JD6 320 aa16.77■□□□□ 0.28
SEC13-217ENST00000482647 RANBP3Q9H6Z4 567 aaPredicted RBP16.77■□□□□ 0.28
SEC13-217ENST00000482647 IGKV1-6A0A0C4DH72 117 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 FAM90A9PA6NNJ1 464 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 ITGB1BP1O14713 200 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 GSTT2P0CG29 244 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 GSTT2BP0CG30 244 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 RAB2BQ8WUD1 216 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 EDARADDQ8WWZ3 215 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 MAFIPQ8WZ33 124 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 CFHR4Q92496 578 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 ST6GALNAC5Q9BVH7 336 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 GHITMQ9H3K2 345 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 OR1A1Q9P1Q5 309 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 COMMD3Q9UBI1 195 aa16.76■□□□□ 0.27
SEC13-217ENST00000482647 XRCC3O43542 346 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 LANCL1O43813 399 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 DIRAS3O95661 229 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 SNRNP70P08621 437 aaKnown RBP16.75■□□□□ 0.27
SEC13-217ENST00000482647 TMBIM6P55061 237 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 HES1Q14469 280 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 HABP2Q14520 560 aaPredicted RBP16.75■□□□□ 0.27
SEC13-217ENST00000482647 IZUMO1Q8IYV9 350 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 OR10J5Q8NHC4 309 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 NUDCD2Q8WVJ2 157 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 AP3S1Q92572 193 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 CMTM3Q96MX0 182 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 RBM14Q96PK6 669 aaKnown RBP16.75■□□□□ 0.27
SEC13-217ENST00000482647 ZNF747Q9BV97 191 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 AUNIPQ9H7T9 357 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 RNF114Q9Y508 228 aa16.75■□□□□ 0.27
SEC13-217ENST00000482647 RAB29O14966 203 aa16.74■□□□□ 0.27
SEC13-217ENST00000482647 BET1O15155 118 aa16.74■□□□□ 0.27
SEC13-217ENST00000482647 ST8SIA5O15466 376 aa16.74■□□□□ 0.27
SEC13-217ENST00000482647 OR2F2O95006 317 aa16.74■□□□□ 0.27
SEC13-217ENST00000482647 ZNF182P17025 639 aaPredicted RBP16.74■□□□□ 0.27
SEC13-217ENST00000482647 HERPUD1Q15011 391 aa16.74■□□□□ 0.27
SEC13-217ENST00000482647 IGSF11Q5DX21 431 aa16.74■□□□□ 0.27
SEC13-217ENST00000482647 BCL7BQ9BQE9 202 aa16.74■□□□□ 0.27
SEC13-217ENST00000482647 SLC25A33Q9BSK2 321 aa16.74■□□□□ 0.27
SEC13-217ENST00000482647 C11orf54Q9H0W9 315 aaPredicted RBP16.74■□□□□ 0.27
SEC13-217ENST00000482647 IFI27L2Q9H2X8 130 aa16.74■□□□□ 0.27
SEC13-217ENST00000482647 PIPOXQ9P0Z9 390 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms