RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 A0A1B0GU03 582 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 HSPB1P04792 205 aaKnown RBP12.58□□□□□ -0.4
ATG4B-220ENST00000482507 IAPPP10997 89 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 RPS10P46783 165 aaKnown RBP12.58□□□□□ -0.4
ATG4B-220ENST00000482507 LINC00596Q86U02 117 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 ZNF573Q86YE8 665 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 OR10V1Q8NGI7 309 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 ZNF251Q9BRH9 671 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 HIPK2Q9H2X6 1198 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 CACNG5Q9UF02 275 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 IFITM10A6NMD0 228 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 FABP1P07148 127 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 ELOBQ15370 118 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 OR8G1Q15617 311 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 ZNF726P1Q15940 193 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 ZNF585BQ52M93 769 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 RPRMQ9NS64 109 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 PPP1R3CQ9UQK1 317 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 URGCP-MRPS24S4R325 110 aa12.58□□□□□ -0.4
ATG4B-220ENST00000482507 MED12LQ86YW9 2145 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 IGHV3-64DA0A0J9YX35 117 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-220ENST00000482507 DEGS1O15121 323 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 S100A9P06702 114 aaKnown RBP12.57□□□□□ -0.4
ATG4B-220ENST00000482507 RPL23AP62750 156 aaKnown RBP12.57□□□□□ -0.4
ATG4B-220ENST00000482507 ARG2P78540 354 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 PLP2Q04941 152 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 STX12Q86Y82 276 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 SNIP1Q8TAD8 396 aaKnown RBP12.57□□□□□ -0.4
ATG4B-220ENST00000482507 RAXQ9Y2V3 346 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 MPC1Q9Y5U8 109 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 LOC102723971A0A1B0GUV8 181 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 OR5B21A6NL26 309 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 SIRPB1O00241 398 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 YIF1AO95070 293 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 METTL15P1P0C7V9 234 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 SLC25A6P12236 298 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 TLE4Q04727 773 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 MDP1Q86V88 176 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 UNKLQ9H9P5 680 aaKnown RBP12.57□□□□□ -0.4
ATG4B-220ENST00000482507 GP6Q9HCN6 339 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 ABI3Q9P2A4 366 aa12.57□□□□□ -0.4
ATG4B-220ENST00000482507 BSNQ9UPA5 3926 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 A0A087WWC5 75 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 TGIF2-C20orf24A0A0A6YYL0 155 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 IFNA17P01571 189 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 APLNRP35414 380 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 RBMXL1Q96E39 390 aaKnown RBP12.56□□□□□ -0.4
ATG4B-220ENST00000482507 RAB40CQ96S21 281 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 PKIBQ9C010 78 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 GNG13Q9P2W3 67 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 ARHGAP21Q5T5U3 1957 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 TRAV1-1A0A0B4J248 108 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 NPIPB11E5RHQ5 1161 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 J3QT63 122 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 SYNGR2O43760 224 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 DFFBO76075 338 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 CELA3BP08861 270 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 PLGLB1Q02325 96 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 KIAA0141Q14154 515 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-220ENST00000482507 FAM90A2PQ658T7 463 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 DPPA3Q6W0C5 159 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 ZNF525Q8N782 197 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 OR1K1Q8NGR3 316 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 RNASE11Q8TAA1 199 aaKnown RBP12.56□□□□□ -0.4
ATG4B-220ENST00000482507 BCL2L2Q92843 193 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-220ENST00000482507 TVP23CQ96ET8 276 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 OPA3Q9H6K4 179 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 ZNF665Q9H7R5 613 aa12.56□□□□□ -0.4
ATG4B-220ENST00000482507 C1QTNF9BB2RNN3 333 aa12.55□□□□□ -0.4
ATG4B-220ENST00000482507 K7EM74 188 aa12.55□□□□□ -0.4
ATG4B-220ENST00000482507 CNOT4O95628 575 aaKnown RBP12.55□□□□□ -0.4
ATG4B-220ENST00000482507 OR2H2O95918 312 aa12.55□□□□□ -0.4
ATG4B-220ENST00000482507 WNT2P09544 360 aa12.55□□□□□ -0.4
ATG4B-220ENST00000482507 C1QTNF9P0C862 333 aa12.55□□□□□ -0.4
ATG4B-220ENST00000482507 SOX8P57073 446 aa12.55□□□□□ -0.4
ATG4B-220ENST00000482507 ERVS71-1P61550 626 aa12.55□□□□□ -0.4
ATG4B-220ENST00000482507 ALKBH6Q3KRA9 238 aa12.55□□□□□ -0.4
ATG4B-220ENST00000482507 KHDC3LQ587J8 217 aa12.55□□□□□ -0.4
ATG4B-220ENST00000482507 NIPSNAP3BQ9BS92 247 aa12.55□□□□□ -0.4
ATG4B-220ENST00000482507 CACNA1AO00555 2505 aa12.55□□□□□ -0.4
ATG4B-220ENST00000482507 IFNA5P01569 189 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 SELEP16581 610 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 ZNF16P17020 682 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-220ENST00000482507 FGF8P55075 233 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-220ENST00000482507 FAM53AQ6NSI3 398 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-220ENST00000482507 SLC25A24Q6NUK1 477 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 LCN15Q6UWW0 184 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 ZNF497Q6ZNH5 498 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 TCTEX1D2Q8WW35 142 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 EDARADDQ8WWZ3 215 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 LSM10Q969L4 123 aaKnown RBP12.54□□□□□ -0.4
ATG4B-220ENST00000482507 PSENENQ9NZ42 101 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 MIOXQ9UGB7 285 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 HBE1P02100 147 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 SP1P08047 785 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 S100GP29377 79 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 MEOX1P50221 254 aa12.54□□□□□ -0.4
ATG4B-220ENST00000482507 HOXA4Q00056 320 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-220ENST00000482507 SCCPDHQ8NBX0 429 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms