RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 METTL8Q9H825 291 aaKnown RBP0.54□□□□□ -2.32
KDM1A-204ENST00000481879 MAT2BQ9NZL9 334 aa0.54□□□□□ -2.32
KDM1A-204ENST00000481879 TMEM216Q9P0N5 145 aa0.54□□□□□ -2.32
KDM1A-204ENST00000481879 PSMD13Q9UNM6 376 aa0.54□□□□□ -2.32
KDM1A-204ENST00000481879 MRPS16Q9Y3D3 137 aaKnown RBP0.54□□□□□ -2.32
KDM1A-204ENST00000481879 A8MUN3 132 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 H0YC42 278 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 ZW10O43264 779 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 CCL2P13500 99 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 GADD45AP24522 165 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 LCN1P31025 176 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 RCVRNP35243 200 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 UGT2B10P36537 528 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 OR1E2P47887 323 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 RAP1GDS1P52306 607 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 LINC00313P59037 77 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 TNNC1P63316 161 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 RAB31Q13636 194 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 FLOT2Q14254 428 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 MTERF4Q7Z6M4 381 aaKnown RBP0.53□□□□□ -2.32
KDM1A-204ENST00000481879 LRRC28Q86X40 367 aaPredicted RBP0.53□□□□□ -2.32
KDM1A-204ENST00000481879 ZNF283Q8N7M2 679 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 LRRC20Q8TCA0 184 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 CIDECQ96AQ7 238 aaPredicted RBP0.53□□□□□ -2.32
KDM1A-204ENST00000481879 ABHD14BQ96IU4 210 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 FAM210AQ96ND0 272 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 CHST5Q9GZS9 411 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 MRM2Q9UI43 246 aaKnown RBP0.53□□□□□ -2.32
KDM1A-204ENST00000481879 LINC00527Q9UJ94 153 aa0.53□□□□□ -2.32
KDM1A-204ENST00000481879 RFPL4AA6NLU0 287 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 ZNF705FA8MVS1 300 aaPredicted RBP0.52□□□□□ -2.33
KDM1A-204ENST00000481879 EFCAB9A8MZ26 197 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 RFPL4AL1F8VTS6 287 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 SNAP29O95721 258 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 ZNF705DP0CH99 300 aaPredicted RBP0.52□□□□□ -2.33
KDM1A-204ENST00000481879 ZNF705BP0CI00 300 aaPredicted RBP0.52□□□□□ -2.33
KDM1A-204ENST00000481879 CCL3P10147 92 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 CDK2P24941 298 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 CRYBB3P26998 211 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 MAGEA12P43365 314 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 RPL14P50914 215 aaKnown RBP0.52□□□□□ -2.33
KDM1A-204ENST00000481879 UAP1Q16222 522 aaPredicted RBP0.52□□□□□ -2.33
KDM1A-204ENST00000481879 ZNF791Q3KP31 576 aaPredicted RBP0.52□□□□□ -2.33
KDM1A-204ENST00000481879 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.52□□□□□ -2.33
KDM1A-204ENST00000481879 MRPL52Q86TS9 123 aaKnown RBP0.52□□□□□ -2.33
KDM1A-204ENST00000481879 ST13P4Q8IZP2 240 aaPredicted RBP0.52□□□□□ -2.33
KDM1A-204ENST00000481879 PACRGLQ8N7B6 248 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 OR5K1Q8NHB7 308 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 C10orf105Q8TEF2 133 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 TMEM239Q8WW34 195 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 CCDC127Q96BQ5 260 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 MED18Q9BUE0 208 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 DNAJC12Q9UKB3 198 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 SNX12Q9UMY4 172 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 POFUT2Q9Y2G5 429 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 PUS1Q9Y606 427 aaKnown RBP eCLIP0.52□□□□□ -2.33
KDM1A-204ENST00000481879 ARAP3Q8WWN8 1544 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 MPDZO75970 2070 aa0.52□□□□□ -2.33
KDM1A-204ENST00000481879 TMSB15BA0A087X1C1 80 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 TRAV41A0A0B4J266 112 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 LINC00862A6NCI5 91 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 OR5K4A6NMS3 321 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 UBFD1O14562 309 aaKnown RBP0.51□□□□□ -2.33
KDM1A-204ENST00000481879 CRXO43186 299 aaPredicted RBP0.51□□□□□ -2.33
KDM1A-204ENST00000481879 CYTH3O43739 400 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 STK16O75716 305 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 LDOC1O95751 146 aaPredicted RBP0.51□□□□□ -2.33
KDM1A-204ENST00000481879 CST4P01036 141 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 IGHV1-69P01742 117 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 COL4A2P08572 1712 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 ZNF728P0DKX0 622 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 CRHBPP24387 322 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 DAPP51397 102 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 FGF12P61328 243 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 ERHP84090 104 aaKnown RBP0.51□□□□□ -2.33
KDM1A-204ENST00000481879 GTF2BQ00403 316 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 ZNF90Q03938 601 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 SLC38A11Q08AI6 406 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 TMEM31Q5JXX7 168 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 MALRD1Q5VYJ5 2156 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 TTC33Q6PID6 262 aaPredicted RBP0.51□□□□□ -2.33
KDM1A-204ENST00000481879 DRAM2Q6UX65 266 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 LRRC6Q86X45 466 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 PLCZ1Q86YW0 608 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 C10orf126Q8N4M7 172 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 FNDC9Q8TBE3 224 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 TMEM131Q92545 1883 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 TMEM56Q96MV1 263 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 MND1Q9BWT6 205 aa0.51□□□□□ -2.33
KDM1A-204ENST00000481879 OTOFQ9HC10 1997 aa0.5□□□□□ -2.33
KDM1A-204ENST00000481879 RAB3GAP2Q9H2M9 1393 aa0.5□□□□□ -2.33
KDM1A-204ENST00000481879 A0A1W2PQD3 144 aa0.5□□□□□ -2.33
KDM1A-204ENST00000481879 GRIFINA4D1Z8 144 aa0.5□□□□□ -2.33
KDM1A-204ENST00000481879 TMEM235A6NFC5 223 aa0.5□□□□□ -2.33
KDM1A-204ENST00000481879 SGCEO43556 437 aa0.5□□□□□ -2.33
KDM1A-204ENST00000481879 MPZL2O60487 215 aa0.5□□□□□ -2.33
KDM1A-204ENST00000481879 LIMS3P0CW19 117 aa0.5□□□□□ -2.33
KDM1A-204ENST00000481879 LIMS4P0CW20 117 aa0.5□□□□□ -2.33
KDM1A-204ENST00000481879 OR13C7P0DN81 318 aa0.5□□□□□ -2.33
KDM1A-204ENST00000481879 NQO2P16083 231 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms