RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 DHRS7BQ6IAN0 325 aaPredicted RBP16.36■□□□□ 0.21
CCM2-214ENST00000481194 OR1L1Q8NH94 360 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 TMED6Q8WW62 240 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 LOC105371242A0A075B767 164 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 IGKV1-9A0A0C4DH69 117 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 ARG1P05089 322 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 PSG2P11465 335 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 OR9G1Q8NH87 305 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 RASL11BQ9BPW5 248 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 OPN4Q9UHM6 478 aa16.36■□□□□ 0.21
CCM2-214ENST00000481194 FOXG1P55316 489 aaPredicted RBP16.35■□□□□ 0.21
CCM2-214ENST00000481194 COMMD1Q8N668 190 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 CRYBA1P05813 215 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 FAM89BQ8N5H3 189 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 PLSCR2Q9NRY7 297 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 SLC25A4P12235 298 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 C4orf17Q53FE4 359 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 PLAC9Q5JTB6 97 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 TPRX1Q8N7U7 411 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 TMEM186Q96B77 213 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 ST6GAL2Q96JF0 529 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 LPAR2Q9HBW0 351 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 HPXP02790 462 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 CMTM2Q8TAZ6 248 aa16.35■□□□□ 0.21
CCM2-214ENST00000481194 IGHV3-7P01780 117 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.34■□□□□ 0.21
CCM2-214ENST00000481194 PFDN5Q99471 154 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 NCOR1O75376 2440 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 C1orf196B1AJZ1 125 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 SRSF10O75494 262 aaKnown RBP16.34■□□□□ 0.21
CCM2-214ENST00000481194 RHBDL1O75783 438 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 MBPP02686 304 aaPredicted RBP16.34■□□□□ 0.21
CCM2-214ENST00000481194 ETV3LQ6ZN32 361 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 DTD1Q8TEA8 209 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 BTF3L4Q96K17 158 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 UBE2L5PA0A1B0GUS4 154 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 LEUTXA8MZ59 168 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 CEACAM8P31997 349 aaPredicted RBP16.34■□□□□ 0.21
CCM2-214ENST00000481194 TNXAQ16473 311 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 WASHC3Q9Y3C0 194 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 H0YL77 283 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 C11orf91Q3C1V1 193 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 NHLRC3Q5JS37 347 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 LHX4Q969G2 390 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 MRGPRFQ96AM1 343 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 NRIP2Q9BQI9 281 aa16.34■□□□□ 0.21
CCM2-214ENST00000481194 CST7O76096 145 aa16.33■□□□□ 0.21
CCM2-214ENST00000481194 ZNF674Q2M3X9 581 aa16.33■□□□□ 0.21
CCM2-214ENST00000481194 DAZAP1Q96EP5 407 aaKnown RBP16.33■□□□□ 0.21
CCM2-214ENST00000481194 COX7A2P2O60397 106 aa16.33■□□□□ 0.21
CCM2-214ENST00000481194 VSIG10L2P0DP72 767 aa16.33■□□□□ 0.21
CCM2-214ENST00000481194 MIDNQ504T8 468 aa16.33■□□□□ 0.21
CCM2-214ENST00000481194 TMEM42Q69YG0 159 aa16.33■□□□□ 0.21
CCM2-214ENST00000481194 OR1L8Q8NGR8 309 aa16.33■□□□□ 0.21
CCM2-214ENST00000481194 MMP24Q9Y5R2 645 aa16.33■□□□□ 0.21
CCM2-214ENST00000481194 GLIPR1P48060 266 aa16.33■□□□□ 0.2
CCM2-214ENST00000481194 ZP1P60852 638 aa16.33■□□□□ 0.2
CCM2-214ENST00000481194 TMEM267Q0VDI3 215 aaPredicted RBP16.33■□□□□ 0.2
CCM2-214ENST00000481194 EXOSC2Q13868 293 aaKnown RBP16.33■□□□□ 0.2
CCM2-214ENST00000481194 ZNF680Q8NEM1 530 aa16.33■□□□□ 0.2
CCM2-214ENST00000481194 H3BP45 60 aa16.33■□□□□ 0.2
CCM2-214ENST00000481194 PGLYRP1O75594 196 aaPredicted RBP16.33■□□□□ 0.2
CCM2-214ENST00000481194 RTN4RL2Q86UN3 420 aa16.33■□□□□ 0.2
CCM2-214ENST00000481194 EP300Q09472 2414 aaPredicted RBP16.33■□□□□ 0.2
CCM2-214ENST00000481194 IGKV3-15P01624 115 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 SRSF7Q16629 238 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCM2-214ENST00000481194 OR11H7Q8NGC8 314 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 MALSU1Q96EH3 234 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 WNT9BO14905 357 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 SLC25A6P12236 298 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 OPRK1P41145 380 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 SOHLH1Q5JUK2 328 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 WDR82Q6UXN9 313 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 LYZL2Q7Z4W2 148 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 OR5C1Q8NGR4 320 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 TMEM230Q96A57 120 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 RNF2Q99496 336 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 CLEC7AQ9BXN2 247 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 KPTNQ9Y664 436 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 OR1L6Q8NGR2 347 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 WFIKKN1Q96NZ8 548 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 PCGF1Q9BSM1 259 aa16.32■□□□□ 0.2
CCM2-214ENST00000481194 TRAF4Q9BUZ4 470 aaPredicted RBP16.32■□□□□ 0.2
CCM2-214ENST00000481194 C1QTNF9BB2RNN3 333 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 C1QTNF9P0C862 333 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 RCC1P18754 421 aaPredicted RBP16.31■□□□□ 0.2
CCM2-214ENST00000481194 ZNF345Q14585 488 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 TEX261Q6UWH6 196 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 OR5T1Q8NG75 326 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 ATP5SQ99766 215 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 U3KQ87 197 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 PLXND1Q9Y4D7 1925 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 FAM24AA6NFZ4 105 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 FAM90A26D6RGX4 464 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 OR5G3P0C626 314 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 POLR2GP62487 172 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCM2-214ENST00000481194 G6PCP35575 357 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 CSN1S1P47710 185 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 RND3P61587 244 aa16.31■□□□□ 0.2
CCM2-214ENST00000481194 NCR3LG1Q68D85 454 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms