RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 LINC01551Q86U37 167 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CALHM3Q86XJ0 350 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 DOLPP1Q86YN1 238 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CBLN2Q8IUK8 224 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 OR10A6Q8NH74 314 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CT45A3Q8NHU0 189 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 FAM57AQ8TBR7 257 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 GPR119Q8TDV5 335 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 RNF145Q96MT1 663 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 TRNT1Q96Q11 434 aaKnown RBP3.2□□□□□ -1.9
UPF3A-207ENST00000481131 ISYNA1Q9NPH2 558 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 UBQLN4Q9NRR5 601 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 CMTM6Q9NX76 183 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 RAB26Q9ULW5 256 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 ZNF443Q9Y2A4 671 aaPredicted RBP3.2□□□□□ -1.9
UPF3A-207ENST00000481131 ZNF835Q9Y2P0 537 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 ZNF337Q9Y3M9 751 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 FAM215AQ9Y5M1 114 aa3.2□□□□□ -1.9
UPF3A-207ENST00000481131 SPTAN1Q13813 2472 aaKnown RBP3.2□□□□□ -1.9
UPF3A-207ENST00000481131 PRR14LQ5THK1 2151 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 NBPF19A0A087WUL8 3843 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 IGLV3-32A0A0A0MS00 114 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 EVPLLA8MZ36 301 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 C5orf58C9J3I9 102 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 RP2O75695 350 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 CBR3O75828 277 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 DCTN3O75935 186 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 CCNB2O95067 398 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 ARG1P05089 322 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 GGT1P19440 569 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 RAB3BP20337 219 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 PPIBP23284 216 aaKnown RBP3.19□□□□□ -1.9
UPF3A-207ENST00000481131 F2RP25116 425 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 LCN1P31025 176 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 CA7P43166 264 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 CSNK1A1P48729 337 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 P2RX1P51575 399 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 DSCR4P56555 118 aaPredicted RBP3.19□□□□□ -1.9
UPF3A-207ENST00000481131 CLDN18P56856 261 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 PSME3P61289 254 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 HERVK_113P61574 105 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 PSPHP78330 225 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 BNIP2Q12982 314 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 GINS1Q14691 196 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 QPRTQ15274 297 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 COQ5Q5HYK3 327 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 CLEC18BQ6UXF7 455 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 Q6ZR03 302 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 RBM45Q8IUH3 476 aaKnown RBP3.19□□□□□ -1.9
UPF3A-207ENST00000481131 MICU2Q8IYU8 434 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 ATP6V1C2Q8NEY4 427 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 GPR32P1Q8NGA4 272 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 OR4D11Q8NGI4 311 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 OR52P1PQ8NH57 321 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 MRGPRFQ96AM1 343 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 TAMM41Q96BW9 452 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 SEH1LQ96EE3 360 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 SDHCQ99643 169 aaPredicted RBP3.19□□□□□ -1.9
UPF3A-207ENST00000481131 MICU1Q9BPX6 476 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 ANKRD60Q9BZ19 345 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 SAV1Q9H4B6 383 aaPredicted RBP3.19□□□□□ -1.9
UPF3A-207ENST00000481131 TMEM38AQ9H6F2 299 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 SDHAF3Q9NRP4 125 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 ANGPT4Q9Y264 503 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 GMEB1Q9Y692 573 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 DOPEY1Q5JWR5 2465 aa3.19□□□□□ -1.9
UPF3A-207ENST00000481131 USP9YO00507 2555 aaPredicted RBP3.18□□□□□ -1.9
UPF3A-207ENST00000481131 IGHV3-15A0A0B4J1V0 119 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 A0A0J9YW62 118 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 TMEM72A0PK05 275 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 PRORSD1PA6NEY8 169 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 CPSF4LA6NMK7 179 aaKnown RBP3.18□□□□□ -1.9
UPF3A-207ENST00000481131 M0QX08 132 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 ENTPD5O75356 428 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 TGM6O95932 706 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 OXTP01178 125 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 EIF4EP06730 217 aaKnown RBP3.18□□□□□ -1.9
UPF3A-207ENST00000481131 DBIP07108 87 aaKnown RBP3.18□□□□□ -1.9
UPF3A-207ENST00000481131 GUSBP08236 651 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 ZNF708P17019 499 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 OR1E2P47887 323 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 IDH2P48735 452 aaKnown RBP3.18□□□□□ -1.9
UPF3A-207ENST00000481131 UBE2MP61081 183 aaKnown RBP3.18□□□□□ -1.9
UPF3A-207ENST00000481131 ERCC8Q13216 396 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 ART3Q13508 389 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 LIN52Q52LA3 116 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 GPR107Q5VW38 600 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 AP1ARQ63HQ0 302 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 CRYBG3Q68DQ2 2970 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 DHRS4L2Q6PKH6 230 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 MTERF4Q7Z6M4 381 aaKnown RBP3.18□□□□□ -1.9
UPF3A-207ENST00000481131 VTCN1Q7Z7D3 282 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 DEFB107AQ8IZN7 70 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 COMMD1Q8N668 190 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 OR10G2Q8NGC3 310 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 OR8J3Q8NGG0 315 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 OR5W2Q8NH69 310 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 ZNF563Q8TA94 476 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 ABHD3Q8WU67 409 aa3.18□□□□□ -1.9
UPF3A-207ENST00000481131 ITLN2Q8WWU7 325 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms