RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 KIR2DS1Q14954 304 aa11.93□□□□□ -0.5
LIMS3-203ENST00000480744 STEAP3Q658P3 488 aa11.93□□□□□ -0.5
LIMS3-203ENST00000480744 NEDD4LQ96PU5 975 aa11.93□□□□□ -0.5
LIMS3-203ENST00000480744 ZNF251Q9BRH9 671 aa11.93□□□□□ -0.5
LIMS3-203ENST00000480744 MRPL20Q9BYC9 149 aaKnown RBP11.93□□□□□ -0.5
LIMS3-203ENST00000480744 MBNL3Q9NUK0 354 aaKnown RBP11.93□□□□□ -0.5
LIMS3-203ENST00000480744 JPT1Q9UK76 154 aa11.93□□□□□ -0.5
LIMS3-203ENST00000480744 ERGIC3Q9Y282 383 aa11.93□□□□□ -0.5
LIMS3-203ENST00000480744 TPRKBQ9Y3C4 175 aa11.93□□□□□ -0.5
LIMS3-203ENST00000480744 WSB1Q9Y6I7 421 aa11.93□□□□□ -0.5
LIMS3-203ENST00000480744 SEC14L6B5MCN3 397 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 DENRO43583 198 aaKnown RBP11.92□□□□□ -0.5
LIMS3-203ENST00000480744 RGS10O43665 173 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 RGS11O94810 467 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 CD1AP06126 327 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 OR5H8P0DN80 308 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 CNTFRP26992 372 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 MAP2K4P45985 399 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 OR3A3P47888 321 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 CFHR3Q02985 330 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 RBM48Q5RL73 367 aaKnown RBP11.92□□□□□ -0.5
LIMS3-203ENST00000480744 FAM27D1Q5T7N8 215 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 C9orf66Q5T8R8 295 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 OR10K2Q6IF99 312 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 RNF152Q8N8N0 203 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 C4orf3Q8WVX3 66 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 PRR25Q96S07 402 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 SULT4A1Q9BR01 284 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 MND1Q9BWT6 205 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 PARP11Q9NR21 331 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 GHRLQ9UBU3 117 aa11.92□□□□□ -0.5
LIMS3-203ENST00000480744 RAMP3O60896 148 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 IGF1P05019 195 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 UBBP0CG47 229 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 ECI1P42126 302 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 HTD2P86397 168 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 SPHARQ15513 63 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 ACSM3Q53FZ2 586 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 GLT8D1Q68CQ7 371 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 TMEM65Q6PI78 240 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 PRSS48Q7RTY5 328 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 ZNF554Q86TJ5 538 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 ODF3L1Q8IXM7 274 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 OR2AK2Q8NG84 335 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 SETD6Q8TBK2 473 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 IL1F10Q8WWZ1 152 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 GALMQ96C23 342 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 RITA1Q96K30 269 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 NABP2Q9BQ15 211 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 FAAP24Q9BTP7 215 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 TMED9Q9BVK6 235 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 TMEM59Q9BXS4 323 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 KCNK15Q9H427 330 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 CHMP1AQ9HD42 196 aaPredicted RBP11.91□□□□□ -0.5
LIMS3-203ENST00000480744 ABRACLQ9P1F3 81 aa11.91□□□□□ -0.5
LIMS3-203ENST00000480744 SAA2-SAA4A0A096LPE2 208 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 G3V318 75 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 ATP6V0E1O15342 81 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 NBR2O15453 112 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 YPEL1O60688 119 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 SAA2P0DJI9 122 aaPredicted RBP11.9□□□□□ -0.5
LIMS3-203ENST00000480744 VSIG8P0DPA2 414 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 PSMB8P28062 276 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 CHATP28329 748 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 C6orf201Q7Z4U5 140 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 OR11H1Q8NG94 326 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 YPEL2Q96QA6 119 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 OR5B12Q96R08 314 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 CCDC90BQ9GZT6 254 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 OR51J1Q9H342 316 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 KIAA1456Q9P272 454 aa11.9□□□□□ -0.5
LIMS3-203ENST00000480744 ST8SIA5O15466 376 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 BLVRBP30043 206 aaPredicted RBP11.89□□□□□ -0.51
LIMS3-203ENST00000480744 RPS27AP62979 156 aaKnown RBP11.89□□□□□ -0.51
LIMS3-203ENST00000480744 MED22Q15528 200 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 HMGN3Q15651 99 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 ZNF260Q3ZCT1 412 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 ZNF833PQ6ZTB9 187 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 LRRTM1Q86UE6 522 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 MS4A15Q8N5U1 240 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 NICN1Q9BSH3 213 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 KLK15Q9H2R5 256 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 Q9H521 79 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 GNB4Q9HAV0 340 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 STEAP1Q9UHE8 339 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 ZNF580Q9UK33 172 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 LRRC42Q9Y546 428 aa11.89□□□□□ -0.51
LIMS3-203ENST00000480744 IGHV7-81A0A0B4J1V7 117 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 TRAV41A0A0B4J266 112 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 HLA-DRB1P01911 266 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 HTR2CP28335 458 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 GABARAPL2P60520 117 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 FHL3Q13643 280 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 TBCEQ15813 527 aaPredicted RBP11.88□□□□□ -0.51
LIMS3-203ENST00000480744 ECSCRQ19T08 205 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 C5orf64Q2M2E5 130 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 HSD17B12Q53GQ0 312 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 C1orf100Q5SVJ3 147 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 LIN54Q6MZP7 749 aa11.88□□□□□ -0.51
LIMS3-203ENST00000480744 FAM131AQ6UXB0 335 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms